Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 30068.m002580 |
Family | AA5 |
Protein Properties | Length: 546 Molecular Weight: 60545.1 Isoelectric Point: 8.7625 |
Chromosome | Chromosome/Scaffold: 30068 Start: 409496 End: 411136 |
Description | glyoxal oxidase-related protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA5 | 24 | 546 | 0 |
QQYQGRWKLLKRSIGISAMHMQLLPNDKIIAFDRTNFGPSNLSLPQGKCPTESQTTDCFAHSVEFDPFNRNIRPLTILTDTWCSSGGLSQDGVLLQSGGY RFGERVVRTFKPCESCDWTEDPKGLISPRWYASNQVLPDGRFIIVGGRYQYNYEFIPKTSSSDQTLYQLPFLKETRYSPLIPNNLYPFLHLSPDGNLFIF ANDRAVLLDYAKNKVVRNYPVMPGNVSRNYPSTGSSVLLPLVLVSNYSTNPDAEVLICGGTSPDSNQKADAGQYVDASKSCGRLVITSANPSWEMEEMPK NRVMGDMIMLPTGEVLIINGAAKGTAGWNAAREPVLNPILYRPDVEKNSNTSRFEIMSPSPIPRLYHSAAHLLSDGRVLVGGSNPNRNYNFTTVYPTELS LEAFYPPYLSSNIPRPNITAIKPGGNLDYKQKFSMEFQLKNQEDPRNICITMVAPSFTTHSFAMNQRLLVLGLDNNGTKKVASGKYVVNVNAPGTAALAP PGYYQLFVVHEGVPSRGIWVHIK |
Full Sequence |
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Protein Sequence Length: 546 Download |
MKTGTLLLLL LAVTSLFLSS IEGQQYQGRW KLLKRSIGIS AMHMQLLPND KIIAFDRTNF 60 GPSNLSLPQG KCPTESQTTD CFAHSVEFDP FNRNIRPLTI LTDTWCSSGG LSQDGVLLQS 120 GGYRFGERVV RTFKPCESCD WTEDPKGLIS PRWYASNQVL PDGRFIIVGG RYQYNYEFIP 180 KTSSSDQTLY QLPFLKETRY SPLIPNNLYP FLHLSPDGNL FIFANDRAVL LDYAKNKVVR 240 NYPVMPGNVS RNYPSTGSSV LLPLVLVSNY STNPDAEVLI CGGTSPDSNQ KADAGQYVDA 300 SKSCGRLVIT SANPSWEMEE MPKNRVMGDM IMLPTGEVLI INGAAKGTAG WNAAREPVLN 360 PILYRPDVEK NSNTSRFEIM SPSPIPRLYH SAAHLLSDGR VLVGGSNPNR NYNFTTVYPT 420 ELSLEAFYPP YLSSNIPRPN ITAIKPGGNL DYKQKFSMEF QLKNQEDPRN ICITMVAPSF 480 TTHSFAMNQR LLVLGLDNNG TKKVASGKYV VNVNAPGTAA LAPPGYYQLF VVHEGVPSRG 540 IWVHIK |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam09118 | DUF1929 | 3.0e-22 | 438 | 545 | 109 | + Domain of unknown function (DUF1929). Members of this family adopt a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core. The 7 strands are arranged in 2 sheets, in a Greek-key topology. Their precise function, has not, as yet, been defined, though they are mostly found in sugar-utilising enzymes, such as galactose oxidase. | ||
cd02851 | E_set_GO_C | 3.0e-26 | 437 | 545 | 110 | + C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. | ||
pfam07250 | Glyoxal_oxid_N | 2.0e-99 | 42 | 283 | 252 | + Glyoxal oxidase N-terminus. This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN83495.1 | 0 | 1 | 546 | 6 | 549 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002272723.1 | 0 | 1 | 546 | 1 | 544 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299426.1 | 0 | 1 | 546 | 1 | 546 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510488.1 | 0 | 28 | 546 | 31 | 547 | Galactose oxidase precursor, putative [Ricinus communis] |
RefSeq | XP_002518913.1 | 0 | 1 | 546 | 1 | 546 | Galactose oxidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2eic_A | 0.000000000004 | 96 | 538 | 217 | 630 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
PDB | 2eib_A | 0.000000000004 | 96 | 538 | 217 | 630 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
PDB | 2vz3_A | 0.000000000004 | 96 | 538 | 217 | 630 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
PDB | 2vz1_A | 0.000000000004 | 96 | 538 | 217 | 630 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
PDB | 2jkx_A | 0.000000000004 | 96 | 538 | 217 | 630 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |