Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.004G281300.1 |
Family | AA5 |
Protein Properties | Length: 634 Molecular Weight: 69788.6 Isoelectric Point: 6.0672 |
Chromosome | Chromosome/Scaffold: 04 Start: 61297592 End: 61300057 |
Description | glyoxal oxidase-related protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA5 | 102 | 622 | 0 |
AATTFKGSWELFLENGGVSAMHLILLPKINQALVFDATVWKISKIKLPGPPCRHVEGTNEEDCFAHSVLMDIETGKLRPLRLNYDTWCSSGGLDINGRLV STGGFNNGSDTVRILDLCDTCDWKEYPGALANGRWYATQVTLGDGKFMVFGGRDFPTYEFVPPEGKKNTHQDVVDFNFLVETHDPVENNLYPFVYLSTDG NIFIFANNRSVILNPKTHKIIHEFPVLPNGARNYPASGSACLLPIILKPNEDRSVIPAEILICGGAPHDAFEKADLQRPKVFLPGSCDCARLDFTKRDSK WNIFNMPSARLLGDMAVLPTGDVLIVNGAKTGSAGWDDAREPNLNPVLYKFQTDGTSPKFTVLNPSNIPRMYHSSFAVLPDAKVLIAGSNTNPGYLDDAL FPTEVRVEKFSPHYLDPNLAMFRQEIIAEKSNNKLKYGQKFTVQIRGSGVIDQQKLQVTIYSPPFVTHGICMNQRLIQLGILEFNKDVIPNTNNIVLQAP MNGNIAQPGYYMLFVNYNGVP |
Full Sequence |
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Protein Sequence Length: 634 Download |
MGLFWRVLII LPLFFAYVNG EHFTYPSRHP GKAELAGFKG PDSLATDGGG FFSGPLVVDN 60 DVTATSGNQG GTTEVTVAKP GDDTLEASKG DDGIRYANLI EAATTFKGSW ELFLENGGVS 120 AMHLILLPKI NQALVFDATV WKISKIKLPG PPCRHVEGTN EEDCFAHSVL MDIETGKLRP 180 LRLNYDTWCS SGGLDINGRL VSTGGFNNGS DTVRILDLCD TCDWKEYPGA LANGRWYATQ 240 VTLGDGKFMV FGGRDFPTYE FVPPEGKKNT HQDVVDFNFL VETHDPVENN LYPFVYLSTD 300 GNIFIFANNR SVILNPKTHK IIHEFPVLPN GARNYPASGS ACLLPIILKP NEDRSVIPAE 360 ILICGGAPHD AFEKADLQRP KVFLPGSCDC ARLDFTKRDS KWNIFNMPSA RLLGDMAVLP 420 TGDVLIVNGA KTGSAGWDDA REPNLNPVLY KFQTDGTSPK FTVLNPSNIP RMYHSSFAVL 480 PDAKVLIAGS NTNPGYLDDA LFPTEVRVEK FSPHYLDPNL AMFRQEIIAE KSNNKLKYGQ 540 KFTVQIRGSG VIDQQKLQVT IYSPPFVTHG ICMNQRLIQL GILEFNKDVI PNTNNIVLQA 600 PMNGNIAQPG YYMLFVNYNG VPCLRSIWIQ ILP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd02851 | E_set_GO_C | 2.0e-20 | 533 | 631 | 100 | + C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. | ||
pfam09118 | DUF1929 | 3.0e-21 | 531 | 631 | 102 | + Domain of unknown function (DUF1929). Members of this family adopt a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core. The 7 strands are arranged in 2 sheets, in a Greek-key topology. Their precise function, has not, as yet, been defined, though they are mostly found in sugar-utilising enzymes, such as galactose oxidase. | ||
pfam07250 | Glyoxal_oxid_N | 2.0e-99 | 122 | 366 | 250 | + Glyoxal oxidase N-terminus. This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL84955.1 | 0 | 75 | 632 | 45 | 594 | AT5g19580/T20D1_100 [Arabidopsis thaliana] |
RefSeq | NP_197459.1 | 0 | 75 | 632 | 45 | 594 | glyoxal oxidase-related [Arabidopsis thaliana] |
RefSeq | XP_002324431.1 | 0 | 107 | 631 | 1 | 521 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002331167.1 | 0 | 107 | 631 | 88 | 608 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514260.1 | 0 | 106 | 631 | 94 | 612 | Galactose oxidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2wq8_A | 0.0000000000002 | 185 | 626 | 246 | 655 | A Chain A, Glycan Labelling Using Engineered Variants Of Galactose Oxidase Obtained By Directed Evolution |
PDB | 2eid_A | 0.0000000000002 | 185 | 626 | 224 | 633 | A Chain A, Galactose Oxidase W290g Mutant |
PDB | 2eib_A | 0.0000000000003 | 185 | 626 | 224 | 633 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
PDB | 1k3i_A | 0.0000000000005 | 185 | 626 | 241 | 650 | A Chain A, Crystal Structure Of The Precursor Of Galactose Oxidase |
PDB | 2vz3_A | 0.0000000000007 | 185 | 626 | 224 | 633 | A Chain A, Crystal Structure Of The Precursor Of Galactose Oxidase |