| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 864961 |
| Family | GH5 |
| Protein Properties | Length: 547 Molecular Weight: 62164.8 Isoelectric Point: 9.0592 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH5 | 30 | 344 | 3.69943e-43 |
| IVDDGNKGRRVKLTCVNWPSHLETAVAEGLSKQSLDSIAEKIVSMGFNCVRLTWPLYLATDESFSDIMTVRQSLRKFRLLEAVSGFQTHNPTILDLPLIK AFQEVVSCLGKHRVMVILDNHISQPGWCCSDNDGNGFFGDKHLNPQVWIKGLKKMASMFANVSSNVVGMCLRNELRGPKQNIKDWYTYMRKGAEAVHSMN PDVLVIVSGLNYATDLSFLRDRPFEVSFRRKLVFEIHWYGFWNSLEGDNLNKICGKETEKMMKMSGFLLEKGVPLFVSEFGIDQRGNNANDNKFLSCFMA LAADLDLDWSLWTLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 547 Download |
| MEKFFFISVF LLPYVITTFA FPLSTDSRWI VDDGNKGRRV KLTCVNWPSH LETAVAEGLS 60 KQSLDSIAEK IVSMGFNCVR LTWPLYLATD ESFSDIMTVR QSLRKFRLLE AVSGFQTHNP 120 TILDLPLIKA FQEVVSCLGK HRVMVILDNH ISQPGWCCSD NDGNGFFGDK HLNPQVWIKG 180 LKKMASMFAN VSSNVVGMCL RNELRGPKQN IKDWYTYMRK GAEAVHSMNP DVLVIVSGLN 240 YATDLSFLRD RPFEVSFRRK LVFEIHWYGF WNSLEGDNLN KICGKETEKM MKMSGFLLEK 300 GVPLFVSEFG IDQRGNNAND NKFLSCFMAL AADLDLDWSL WTLAGSYYIR EKTIGTDETY 360 GVLDWNWSSI RNSTILQMIS AIQSPFQGLM ETQPKKIMFH PSTGLCIVRK SLFQLKLGSC 420 NRSESWKLSS HRVLSLTEEK ILCLKAYEDG KSVKLRLFFS DSYCSKWKLL SDSKMQLSSI 480 TKNGVSICLD VDSNNNNIVT NSCKCLLGNS SCDPRSQWFK LVTSTRRRSK PKPFLQISPY 540 SKTSTF* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00150 | Cellulase | 3.0e-11 | 61 | 341 | 293 | + Cellulase (glycosyl hydrolase family 5). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB02432.1 | 0 | 1 | 543 | 9 | 553 | unnamed protein product [Arabidopsis thaliana] |
| RefSeq | NP_189244.1 | 0 | 1 | 543 | 1 | 543 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002312657.1 | 0 | 20 | 529 | 9 | 516 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002315653.1 | 0 | 19 | 532 | 1 | 512 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515055.1 | 0 | 20 | 538 | 31 | 547 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ece_B | 0.00000009 | 25 | 310 | 8 | 284 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 1ece_A | 0.00000009 | 25 | 310 | 8 | 284 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 1vrx_B | 0.00000009 | 25 | 310 | 8 | 284 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1vrx_A | 0.00000009 | 25 | 310 | 8 | 284 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 3pzv_D | 0.0002 | 117 | 318 | 92 | 263 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
