| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr4g091610.1 |
| Family | GH5 |
| Protein Properties | Length: 537 Molecular Weight: 60173.2 Isoelectric Point: 6.0974 |
| Chromosome | Chromosome/Scaffold: 4 Start: 31379035 End: 31382079 |
| Description | Cellulase (glycosyl hydrolase family 5) protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH5 | 35 | 350 | 5.60519e-45 |
| IDDATGERMKLTCAHWVGHATPMLVEGLDKLPIQDIANQIAKSGFNCVRLSYATYMFTRHANDTIRDTLYSLDIPKDVVSAIEKHNPLMLNMTHVQAYEA AIDALGEKGVMVLIDNHVSMAEWCCDNNDQNGFFGDRHFHPDEWLQGLAFIAKHFRGKPNVIAMDLRNELRGGRQNLPDWYKYVSQGASTIHKHNPDLLI VISGLNFDNDLSFLKKKTLDLNFTNKLVYEAHIYSFSGNQDRWNLQPMNWVCSSVIENLNDQAGFLISGNNPVPLFISEFGYDMTGGNAVDNKFMPCFVS YAASVDLDWSLWSFGG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 537 Download |
| MSKSSLLLVS TIFIAILTSY CCNSFPLSTQ KRWIIDDATG ERMKLTCAHW VGHATPMLVE 60 GLDKLPIQDI ANQIAKSGFN CVRLSYATYM FTRHANDTIR DTLYSLDIPK DVVSAIEKHN 120 PLMLNMTHVQ AYEAAIDALG EKGVMVLIDN HVSMAEWCCD NNDQNGFFGD RHFHPDEWLQ 180 GLAFIAKHFR GKPNVIAMDL RNELRGGRQN LPDWYKYVSQ GASTIHKHNP DLLIVISGLN 240 FDNDLSFLKK KTLDLNFTNK LVYEAHIYSF SGNQDRWNLQ PMNWVCSSVI ENLNDQAGFL 300 ISGNNPVPLF ISEFGYDMTG GNAVDNKFMP CFVSYAASVD LDWSLWSFGG SYYFREGSVG 360 AGETYAVMDY DWKNYRDPKF PQKFQLLQKK IQDPTSNLSK SHIMFHPLTG KCAHANGSNN 420 ELVLGDCKSH SEWSFEGDGS PIRLMDSAMC LKAEGEGLPA TLSEHCLSPQ SSWKSVSKTG 480 LHLATSHGNG PLFCLEMESD SSKIVTRKCI CIDENDSSCL DNPQSQWFQL ISTNFS* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00458 | RICIN | 0.006 | 405 | 451 | 50 | + Ricin-type beta-trefoil. Carbohydrate-binding domain formed from presumed gene triplication. | ||
| COG2730 | BglC | 7.0e-6 | 66 | 220 | 158 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| pfam00150 | Cellulase | 4.0e-17 | 37 | 350 | 320 | + Cellulase (glycosyl hydrolase family 5). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABD32354.1 | 0 | 1 | 536 | 1 | 536 | Glycoside hydrolase, family 5; Ricin B-related lectin [Medicago truncatula] |
| EMBL | CBI34404.1 | 0 | 3 | 535 | 18 | 560 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002272534.1 | 0 | 3 | 535 | 2 | 544 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002509877.1 | 0 | 5 | 535 | 4 | 546 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| RefSeq | XP_002509879.1 | 0 | 31 | 535 | 31 | 535 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1vrx_B | 7e-16 | 35 | 373 | 13 | 337 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1vrx_A | 7e-16 | 35 | 373 | 13 | 337 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1ece_B | 8e-16 | 35 | 373 | 13 | 337 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 1ece_A | 8e-16 | 35 | 373 | 13 | 337 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 2zun_C | 0.0000007 | 33 | 269 | 49 | 300 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
