| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra011507 |
| Family | CE6 |
| Protein Properties | Length: 264 Molecular Weight: 28952.7 Isoelectric Point: 6.6254 |
| Chromosome | Chromosome/Scaffold: 01 Start: 1893695 End: 1894559 |
| Description | Domain of unknown function (DUF303) |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE6 | 96 | 192 | 5.8e-30 |
| GPGMAFANAVRKRSDSDSDVIGLVPCAVGGTAIKEWERGSRLYETMVKRAEESRRYGGEIKAMLWYQGESDVSDIHDAESYGRNMTRLVKNLRHDLN | |||
| Full Sequence |
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| Protein Sequence Length: 264 Download |
| MEGRSTTTSA AESPEIQYHP PNPPNQIFIL SGQSNMAGRG GVVKDHHQNR WVWDKIVPSE 60 CSPDSSILRL RADLRWEEAR EPLHADIDTG KVCGVGPGMA FANAVRKRSD SDSDVIGLVP 120 CAVGGTAIKE WERGSRLYET MVKRAEESRR YGGEIKAMLW YQGESDVSDI HDAESYGRNM 180 TRLVKNLRHD LNLPSLPIIQ VAITSGGGYI DKVREAQLGL KLSNVVCVDA KGLQLKPDNL 240 HLTTEAQVQL GLSLAQAYLS NFC* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03629 | DUF303 | 2.0e-37 | 26 | 259 | 280 | + Domain of unknown function (DUF303). Distribution of this domain seems limited to prokaryotes and viruses. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2APJ | 0 | 1 | 263 | 1 | 260 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| GenBank | AAM65927.1 | 0 | 1 | 263 | 1 | 260 | unknown [Arabidopsis thaliana] |
| EMBL | CAA17550.1 | 0 | 1 | 204 | 776 | 976 | receptor protein kinase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_567960.1 | 0 | 1 | 263 | 1 | 260 | hydrolase [Arabidopsis thaliana] |
| RefSeq | XP_002300236.1 | 0 | 26 | 259 | 2 | 234 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2apj_D | 0 | 1 | 263 | 1 | 260 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 2apj_C | 0 | 1 | 263 | 1 | 260 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 2apj_B | 0 | 1 | 263 | 1 | 260 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 2apj_A | 0 | 1 | 263 | 1 | 260 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 1zmb_F | 8e-24 | 28 | 260 | 5 | 226 | A Chain A, Crystal Structure Of The Putative Acetylxylan Esterase From Clostridium Acetobutylicum, Northeast Structural Genomics Target Car6 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| EV137047 | 235 | 2 | 233 | 0 |
| EV076608 | 206 | 1 | 206 | 0 |
| AJ609346 | 253 | 1 | 253 | 0 |
| FG564705 | 220 | 1 | 217 | 0 |
| EX659616 | 249 | 20 | 262 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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