| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00054854m |
| Family | CE6 |
| Protein Properties | Length: 234 Molecular Weight: 24543.4 Isoelectric Point: 8.6344 |
| Chromosome | Chromosome/Scaffold: 0211874 Start: 1428 End: 2129 |
| Description | Domain of unknown function (DUF303) |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE6 | 98 | 194 | 4.6e-29 |
| GPGMPFAHAVLAACGNAVPAVGLVPCAQGGTPLANWTRGTELYDRMVTRARAAMGGGGELAAVLWYQGETDAMSKEDAELYQGRMEAFVRDVRRDLG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 234 Download |
| MAATLQPLLP CFLLLLLLTP GAAGAGRHTG GRTLVFILAG QSNMSGRGGA TSGTWDGVVP 60 PECAPSPRIL RLSPALRWEV AREPLHAGID VGNVLGVGPG MPFAHAVLAA CGNAVPAVGL 120 VPCAQGGTPL ANWTRGTELY DRMVTRARAA MGGGGELAAV LWYQGETDAM SKEDAELYQG 180 RMEAFVRDVR RDLGRADLLV VQVGIATAQY GGKFLDRVRE AQKAVTLSLP NVKY 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03629 | DUF303 | 5.0e-32 | 35 | 232 | 249 | + Domain of unknown function (DUF303). Distribution of this domain seems limited to prokaryotes and viruses. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY92660.1 | 0 | 33 | 234 | 28 | 229 | hypothetical protein OsI_14409 [Oryza sativa Indica Group] |
| RefSeq | NP_001051957.1 | 0 | 34 | 234 | 31 | 231 | Os03g0857600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001150914.1 | 0 | 33 | 234 | 28 | 230 | receptor protein kinase-like protein [Zea mays] |
| RefSeq | XP_002461948.1 | 0 | 32 | 234 | 28 | 233 | hypothetical protein SORBIDRAFT_02g011020 [Sorghum bicolor] |
| RefSeq | XP_002466062.1 | 0 | 34 | 234 | 31 | 242 | hypothetical protein SORBIDRAFT_01g000530 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2apj_D | 0 | 35 | 228 | 24 | 220 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 2apj_C | 0 | 35 | 228 | 24 | 220 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 2apj_B | 0 | 35 | 228 | 24 | 220 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 2apj_A | 0 | 35 | 228 | 24 | 220 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 1zmb_F | 0.000000000000005 | 36 | 231 | 5 | 178 | A Chain A, Crystal Structure Of The Putative Acetylxylan Esterase From Clostridium Acetobutylicum, Northeast Structural Genomics Target Car6 |
