| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10004382m |
| Family | GH9 |
| Protein Properties | Length: 623 Molecular Weight: 69406.7 Isoelectric Point: 8.9724 |
| Chromosome | Chromosome/Scaffold: 7 Start: 6253290 End: 6255689 |
| Description | glycosyl hydrolase 9A3 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH9 | 109 | 585 | 0 |
| NYTLALRQALNFFNAQQSGKLPKKNINNVTWRGDSCLQDGKGDQGQSYTDLVGGYYDAGDAIKFNFPMSYAMTMLSWSVIEYSTKYEAAGELNHVKELIK WGTDYFLKTFNSTADTINVMVEQVGYGSPGGGDELHNDHYCWMRPEDIHYKRTVSQCYSGCSDLAAEMAAALASASIVFKDNRLYSEKLVLGAKTLYKFA TFIKARYSKPGRDSSNFYNSTLFWDELIWGGAWLYYATGNVTYLSDVTTHTIANHAGAFGNSSYYGVFSWDNKLPGAQLLLTRMRLFLSPGYPYEDILSA FHNHTGRVMCSYLPDFTKFKRTKGGLIKLNHGDPQPLQYAANAAFLAALYSDYLVAADTPGWYCGPNFYTTEYLRDFSRSQIDYILGKNPRKMSYVVGYG QRYPKHVHHRGASIPRNKKESCTGGWKWKKSKDANPNIIYGAMVAGPDKNDGFHDVRTNYNYTEPTLAGNAGLVAAL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 623 Download |
| MYGRDPWGGP LEINAADTLI DDDRRSRNLQ DLDRAGLSRP LDETQQSWLL GPKELKKKKY 60 VDLGCILVSR KIFLWTLGIV VATAFLSGFI TLIVRTVPHH KHKPPSPDNY TLALRQALNF 120 FNAQQSGKLP KKNINNVTWR GDSCLQDGKG DQGQSYTDLV GGYYDAGDAI KFNFPMSYAM 180 TMLSWSVIEY STKYEAAGEL NHVKELIKWG TDYFLKTFNS TADTINVMVE QVGYGSPGGG 240 DELHNDHYCW MRPEDIHYKR TVSQCYSGCS DLAAEMAAAL ASASIVFKDN RLYSEKLVLG 300 AKTLYKFATF IKARYSKPGR DSSNFYNSTL FWDELIWGGA WLYYATGNVT YLSDVTTHTI 360 ANHAGAFGNS SYYGVFSWDN KLPGAQLLLT RMRLFLSPGY PYEDILSAFH NHTGRVMCSY 420 LPDFTKFKRT KGGLIKLNHG DPQPLQYAAN AAFLAALYSD YLVAADTPGW YCGPNFYTTE 480 YLRDFSRSQI DYILGKNPRK MSYVVGYGQR YPKHVHHRGA SIPRNKKESC TGGWKWKKSK 540 DANPNIIYGA MVAGPDKNDG FHDVRTNYNY TEPTLAGNAG LVAALVALSG GIAVGGIDKN 600 TMFSAVPPLY PATPPPPAPW TP* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00119 | PLN00119 | 1.0e-102 | 109 | 573 | 475 | + endoglucanase | ||
| PLN02266 | PLN02266 | 1.0e-103 | 74 | 573 | 514 | + endoglucanase | ||
| PLN02340 | PLN02340 | 1.0e-109 | 106 | 574 | 482 | + endoglucanase | ||
| PLN02345 | PLN02345 | 2.0e-133 | 113 | 574 | 469 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 7.0e-144 | 109 | 574 | 471 | + Glycosyl hydrolase family 9. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC49704.1 | 0 | 1 | 606 | 1 | 601 | endo-1,4-beta-glucanase [Solanum lycopersicum] |
| GenBank | AAN72232.1 | 0 | 1 | 606 | 1 | 605 | At5g49720/K2I5_8 [Arabidopsis thaliana] |
| EMBL | CAB51903.1 | 0 | 1 | 606 | 1 | 605 | cellulase; endo-1,4-beta-D-glucanase [Brassica napus] |
| RefSeq | NP_194157.1 | 0 | 1 | 609 | 1 | 607 | ATGH9A3 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A3); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_199783.1 | 0 | 1 | 606 | 1 | 605 | ATGH9A1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A1); cellulase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 109 | 595 | 4 | 432 | A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii |
| PDB | 1ksc_A | 0 | 109 | 595 | 4 | 432 | A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii |
| PDB | 1ks8_A | 0 | 109 | 595 | 4 | 432 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 2xfg_A | 0 | 103 | 588 | 17 | 459 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 4tf4_B | 0 | 109 | 588 | 5 | 440 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
