| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.002G071200.1 |
| Family | GH9 |
| Protein Properties | Length: 208 Molecular Weight: 23245.3 Isoelectric Point: 9.9193 |
| Chromosome | Chromosome/Scaffold: 02 Start: 4918347 End: 4920596 |
| Description | glycosyl hydrolase 9A1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH9 | 16 | 141 | 3.1e-29 |
| HHGEPLQFSATASFLSKLYSNCLKLLRRSGVYYMLGDNPKKMSYMVGFGNKYPTQVHHRVASIRWDDQNYSCPEGDRWLSSKEPNPNILYGAMVAGPDKL DNFLDERKVMVHRATIASNADLVVAL | |||
| Full Sequence |
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| Protein Sequence Length: 208 Download |
| MKYTTGHQVG RSSRPHHGEP LQFSATASFL SKLYSNCLKL LRRSGVYYML GDNPKKMSYM 60 VGFGNKYPTQ VHHRVASIRW DDQNYSCPEG DRWLSSKEPN PNILYGAMVA GPDKLDNFLD 120 ERKVMVHRAT IASNADLVVA LIALHDLPHK SSDSNDTHLG IDLLHLRTIK AVFTRRASQT 180 NLSMQHHGTK STAGYDQVEG RSNGKIH* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02171 | PLN02171 | 2.0e-27 | 21 | 122 | 125 | + endoglucanase | ||
| PLN02340 | PLN02340 | 1.0e-27 | 21 | 138 | 142 | + endoglucanase | ||
| PLN00119 | PLN00119 | 7.0e-29 | 21 | 144 | 148 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 5.0e-31 | 20 | 141 | 132 | + Glycosyl hydrolase family 9. | ||
| PLN02345 | PLN02345 | 4.0e-31 | 21 | 143 | 144 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAQ63883.1 | 3e-38 | 14 | 153 | 432 | 592 | cellulase [Medicago truncatula] |
| EMBL | CAN71528.1 | 7.9874e-44 | 14 | 168 | 447 | 604 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002278065.1 | 0 | 14 | 168 | 440 | 615 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002302191.1 | 0 | 1 | 207 | 1 | 207 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002526151.1 | 0 | 17 | 146 | 432 | 582 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4tf4_B | 0.00000000003 | 21 | 144 | 316 | 440 | A Chain A, Hevamine Mutant D125aE127A IN COMPLEX WITH TETRA-Nag |
| PDB | 4tf4_A | 0.00000000003 | 21 | 144 | 316 | 440 | A Chain A, Hevamine Mutant D125aE127A IN COMPLEX WITH TETRA-Nag |
| PDB | 3tf4_B | 0.00000000003 | 21 | 144 | 316 | 440 | A Chain A, Hevamine Mutant D125aE127A IN COMPLEX WITH TETRA-Nag |
| PDB | 3tf4_A | 0.00000000003 | 21 | 144 | 316 | 440 | A Chain A, Hevamine Mutant D125aE127A IN COMPLEX WITH TETRA-Nag |
| PDB | 1tf4_B | 0.00000000003 | 21 | 144 | 316 | 440 | A Chain A, Hevamine Mutant D125aE127A IN COMPLEX WITH TETRA-Nag |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| EX253342 | 123 | 43 | 164 | 9.99967e-42 |
| FY829761 | 112 | 54 | 164 | 2e-40 |
| CA922432 | 161 | 14 | 153 | 1e-39 |
| BQ165568 | 161 | 14 | 153 | 2e-39 |
| CO098875 | 120 | 46 | 164 | 7e-38 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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