CAZyme Information

Basic Information
SpeciesCapsella rubella
Cazyme IDCarubv10023173m
FamilyGT58
Protein PropertiesLength: 459 Molecular Weight: 51895.9 Isoelectric Point: 9.7305
ChromosomeChromosome/Scaffold: 4 Start: 14903762 End: 14906566
Descriptionasparagine-linked glycosylation 3
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT58564200
  VALIFADAILVALIIAYVPYTKIDWDAYMSQVSGFLGGERDYGNLKGDTGPLVYPAGFLYVYSAVQNLTGGQVYSAQILFGVLYIVNLAIVLFIYVKTDV
  VPWWALSLLCLSKRIHSIFVLRLFNDCFAMTLLHASVALFLYRKWHLGMVFFSGAVSIKMNVLLYAPPLLLLLLKAMHIVGVVSALAGAALVQILVGLPF
  LITYPVSYIANAFDLGRVFIHFWSVNFKFVPERIFVSKEFAVCLLIVHLCLLAVFANYKWCKYEGGIIGFMRSRRFFLTLPLSLSFSDASTSLILTKEHI
  VTAMFVGNFIGIVCARSLHYQFYSWYFYSLPYLLWRTLFPTWLRLILFVGIELCWNLYPSTPASS
Full Sequence
Protein Sequence     Length: 459     Download
MKVVVCYAAF GRHCLRFALL PSMAGAASLR ASRSRRHGKE TIRSDIFKNR TITFAVALIF    60
ADAILVALII AYVPYTKIDW DAYMSQVSGF LGGERDYGNL KGDTGPLVYP AGFLYVYSAV    120
QNLTGGQVYS AQILFGVLYI VNLAIVLFIY VKTDVVPWWA LSLLCLSKRI HSIFVLRLFN    180
DCFAMTLLHA SVALFLYRKW HLGMVFFSGA VSIKMNVLLY APPLLLLLLK AMHIVGVVSA    240
LAGAALVQIL VGLPFLITYP VSYIANAFDL GRVFIHFWSV NFKFVPERIF VSKEFAVCLL    300
IVHLCLLAVF ANYKWCKYEG GIIGFMRSRR FFLTLPLSLS FSDASTSLIL TKEHIVTAMF    360
VGNFIGIVCA RSLHYQFYSW YFYSLPYLLW RTLFPTWLRL ILFVGIELCW NLYPSTPASS    420
GMLLCLHLII LMGLWFAPSD NPYQLKEDNN SQRHKKHM* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam05208ALG36.0e-15854420373+
Gene Ontology
GO TermDescription
GO:0005783endoplasmic reticulum
GO:0016021integral to membrane
GO:0016758transferase activity, transferring hexosyl groups
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAL16193.10234561437AF428424_1 At2g47760/F17A22.15 [Arabidopsis thaliana]
GenBankABK95338.10224562422unknown [Populus trichocarpa]
RefSeqNP_001031556.10234561436ALG3; alpha-1,3-mannosyltransferase/ catalytic [Arabidopsis thaliana]
RefSeqNP_001031557.10233991380ALG3; alpha-1,3-mannosyltransferase/ catalytic [Arabidopsis thaliana]
RefSeqNP_182297.10234561437ALG3; alpha-1,3-mannosyltransferase/ catalytic [Arabidopsis thaliana]
Transmembrane Domains
StartEnd
5274
128150
174196
206228
235257
289311
331350
355374
387406
416438
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EX104259276523260
GT046057325834070
DK466748252452950
DV154672261623220
DR942296266533180
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_003_00758.1Aquca_003_00758.2Aquca_003_00758.3
Arabidopsis lyrata904250
Arabidopsis thalianaAT2G47760.3AT2G47760.1AT2G47760.2
Brachypodium distachyonBradi2g04440.1
Brassica rapaBra000461.29.139Bra004431
Carica papayaevm.model.supercontig_9.209
Citrus clementinaCiclev10020260m
Citrus sinensisorange1.1g014346morange1.1g015618m.102.369orange1.1g015618m.102.369orange1.1g015618m.30.104orange1.1g015618m.30.104
Cucumis sativusCucsa.205720.1
Eucalyptus grandisEucgr.H01160.1
Fragaria vescamrna10569.1-v1.0-hybrid
Glycine maxGlyma19g39740.1Glyma03g37130.1
Gossypium raimondiiGorai.008G011100.2Gorai.008G011100.1
Linum usitatissimumLus10031921Lus10035085
Malus domesticaMDP0000161757
Manihot esculentacassava4.1_008035m
Medicago truncatulaMedtr7g108620.1
Mimulus guttatusmgv1a006267mmgv1a008112m
Oryza sativaLOC_Os01g07720.4LOC_Os01g07720.2
Panicum virgatumPavirv00058096mPavirv00012164m
Physcomitrella patensPp1s58_150V6.1
Phaseolus vulgarisPhvul.001G205800.1
Picea abiesMA_10426799g0010
Populus trichocarpaPotri.014G131600.2Potri.014G131600.1Potri.014G131600.3
Prunus persicappa005841m
Ricinus communis30129.m000370
Setaria italicaSi001564m
Selaginella moellendorffii96090
Sorghum bicolorSb03g004440.1
Thellungiella halophilaThhalv10001458m
Vitis viniferaGSVIVT01027976001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny