| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00012164m |
| Family | GT58 |
| Protein Properties | Length: 293 Molecular Weight: 33730.8 Isoelectric Point: 10.2126 |
| Chromosome | Chromosome/Scaffold: 087037 Start: 359 End: 3050 |
| Description | asparagine-linked glycosylation 3 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT58 | 1 | 264 | 0 |
| LPWWALGLLCLSKRVHSIFVLRLFNDGFAMTLLHAAMVLIIYHKWYLGLIVFSGAVSVKMNVLLFAPSLLLLMVKAMSIKGVFFALFGAAVVQVLLGMPF LLSHPVEYISRAFNLGRVFIHFWSVNFKFIPEKLFVSKELAIALLILHLTTLMVFAHYKWLKHEGGLFGFLHSRFKHAKSILQLFSSKPRPCILSKEHIV TVMFVSNFIGIVCARSLHYQFYSWYFYSLPFLLWKTHFPTPLRIILFLGVELCWNIYPSTAYSS | |||
| Full Sequence |
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| Protein Sequence Length: 293 Download |
| LPWWALGLLC LSKRVHSIFV LRLFNDGFAM TLLHAAMVLI IYHKWYLGLI VFSGAVSVKM 60 NVLLFAPSLL LLMVKAMSIK GVFFALFGAA VVQVLLGMPF LLSHPVEYIS RAFNLGRVFI 120 HFWSVNFKFI PEKLFVSKEL AIALLILHLT TLMVFAHYKW LKHEGGLFGF LHSRFKHAKS 180 ILQLFSSKPR PCILSKEHIV TVMFVSNFIG IVCARSLHYQ FYSWYFYSLP FLLWKTHFPT 240 PLRIILFLGV ELCWNIYPST AYSSLLLLFL HISILLGIWF SPTEYPYIDK TT* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam05208 | ALG3 | 3.0e-92 | 1 | 260 | 264 | + ALG3 protein. The formation of N-glycosidic linkages of glycoproteins involves the ordered assembly of the common Glc3Man9GlcNAc2 core-oligosaccharide on the lipid carrier dolichyl pyrophosphate. Whereas early mannosylation steps occur on the cytoplasmic side of the endoplasmic reticulum with GDP-Man as donor, the final reactions from Man5GlcNAc2-PP-Dol to Man9GlcNAc2-PP-Dol on the lumenal side use Dol-P-Man. ALG3 gene encodes the Dol-P-Man:Man5GlcNAc2-PP-Dol mannosyltransferase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005783 | endoplasmic reticulum |
| GO:0016021 | integral to membrane |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK95338.1 | 0 | 1 | 290 | 129 | 414 | unknown [Populus trichocarpa] |
| GenBank | ACF84701.1 | 0 | 1 | 288 | 136 | 423 | unknown [Zea mays] |
| RefSeq | NP_001143883.1 | 0 | 1 | 288 | 136 | 423 | hypothetical protein LOC100276684 [Zea mays] |
| RefSeq | XP_002320351.1 | 0 | 1 | 290 | 129 | 414 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002455106.1 | 0 | 1 | 292 | 132 | 424 | hypothetical protein SORBIDRAFT_03g004440 [Sorghum bicolor] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| dolichyl-diphosphooligosaccharide biosynthesis | RXN-5466 | EC-2.4.1.258 | Dol-P-Man:Man5GlcNAc2-PP-Dol α-1,3-mannosyltransferase |
