CAZyme Information

Basic Information
SpeciesVitis vinifera
Cazyme IDGSVIVT01021662001
FamilyCBM57
Protein PropertiesLength: 845 Molecular Weight: 93853.9 Isoelectric Point: 6.3573
ChromosomeChromosome/Scaffold: 10 Start: 8903917 End: 8907377
Descriptionhercules receptor kinase 2
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
CBM572223754.7e-21
  YRLNVGGPEITPDQDLDLWRTWDVDSSYMFTANAGSEVHNSSNITYASMNDSVVAPLAVYETARSMSNTEVLEKRFNMSWKFEVDPDFEYLIRLHFCELF
  YERANQRSFRIYINNRTAADNFDVFLRAGGMNKAYHQDFLDMVSSKINTLWIQL
Full Sequence
Protein Sequence     Length: 845     Download
MEVWGLILVV MVSVFVGNGE AQAKSLLINC GTNSSVNVDG RRWVGDLAPD NNLTLSSLGV    60
AASTDTFSGD TTFAQLYETA RIFPDSLNYT ASLNQGNYSV RLHFYPFSFE KYNTNESSFS    120
VTANGLKLAS QLNVPGEISH KNSYLQSSGS NSSSFSMIKE YFLTVDSGLL VIEFAPTKGS    180
FGFINAIEIV PVVDNLFFSS VSKVGGTNSV LNLSGRGIEA MYRLNVGGPE ITPDQDLDLW    240
RTWDVDSSYM FTANAGSEVH NSSNITYASM NDSVVAPLAV YETARSMSNT EVLEKRFNMS    300
WKFEVDPDFE YLIRLHFCEL FYERANQRSF RIYINNRTAA DNFDVFLRAG GMNKAYHQDF    360
LDMVSSKINT LWIQLGPDTT VGASGTDAIL NGLEIFKLSR NGNLAYVERF DSTKSSAGSK    420
TSKTQTLWVG LGAGVASIAM MAVIFSLIFY FCKRWRKKSS ATKNKSPGWR PLFLHVNSTN    480
AKGMSQSLSV SLASNRAGKR FTLTEIRAAT NNFDESLVIG VGGFGKVYKG EIDDGTPAAI    540
KRANPQSEQG LAEFQTEIEM LSKLRHRHLV SMIGFCEEQN EMILVYEYMA NGTLRSHLFG    600
SELPPLTWKQ RLEACIGAAR GLHYLHTGAE RGIIHRDVKT TNILIDENFV AKMADFGLSK    660
TGPAWEHTHV STAVKGSFGY LDPEYFRRQQ LTEKSDVYSF GVVLFEVVCA RAVINPSLPR    720
DQINLAEWAM HWQHQRSLET IIDPHLKGNY SPDSLRKFGE IAEKCLADEG KNRPTMGEVL    780
WHLEYVLQLH EAWLRTNVGE NSFSSSQALG NLEEGLESAH LDEENEISLK MKQKRESATR    840
GINA* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
smart00219TyrKc8.0e-51518783278+
smart00221STYKc3.0e-51518783278+
cd00180PKc3.0e-51519714200+
cd00192PTKc1.0e-52518784281+
pfam12819Malectin_like2.0e-6628398385+
Gene Ontology
GO TermDescription
GO:0004672protein kinase activity
GO:0005524ATP binding
GO:0006468protein phosphorylation
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCAN73534.1018441802hypothetical protein [Vitis vinifera]
EMBLCBI31024.1018441844unnamed protein product [Vitis vinifera]
RefSeqXP_002264211.10184446889PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002330599.1038139821predicted protein [Populus trichocarpa]
RefSeqXP_002523186.1028178822kinase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2qkw_B050079228319A Chain A, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto
PDB3hgk_D050079228319E Chain E, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto
PDB3hgk_C050079228319E Chain E, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto
PDB3hgk_B050079228319E Chain E, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto
PDB3hgk_A050079228319E Chain E, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto
Transmembrane Domains
StartEnd
427449
Signal Peptide
Cleavage Site
21
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
ES8051853794488130
EX3576022575237790
HO7987985042677450
DY9713292905007890
ES7930812455698130
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_026_00352.1
Brassica rapaBra032404
Citrus clementinaCiclev10014250m
Citrus sinensisorange1.1g047215m
Eucalyptus grandisEucgr.K01945.1
Fragaria vescamrna28878.1-v1.0-hybrid
Malus domesticaMDP0000843097
Manihot esculentacassava4.1_030005m
Panicum virgatumPavirv00014838m
Populus trichocarpaPotri.011G164700.1Potri.001G467000.1
Setaria italicaSi028931m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny