| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01037352001 |
| Family | CE8 |
| Protein Properties | Length: 416 Molecular Weight: 45096.9 Isoelectric Point: 8.0251 |
| Chromosome | Chromosome/Scaffold: 6 Start: 15304498 End: 15306529 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 201 | 403 | 0 |
| NIVVSKDGSGDYTTIGAAITAASKRSGSGRYVIYVKAGTYSENVQIGSGLKNIMLLGDGIGKTIVTGSKSVGGGSTTFNSATVAVVGDGFIARGMTFRNT AGASNHQAVALRSGSDLSVYYQCSFEGYQDTLYTYSERQFYRECDIYGTVDFIFGNAAVVFQNCNIYVRNPPNKINTVTAQGRTDPNQNTGISIHDCKVT AAS | |||
| Full Sequence |
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| Protein Sequence Length: 416 Download |
| MAFVALVLLS LLTPLVSVYS SDDVKPWCSQ TPHPQPCEYF LSQKTDHSLI KQKSDFLNIS 60 MQLALERAMI AHGDTFSLGS KCRNEREKAA WNDCLELYEH TILKLNKTLD SNTRCTQADA 120 QTWLSTALTN LQTCQDGFID LGVSDYVLPL MSNNVSKLIS NTLSINKVPY AEPSYKGGYP 180 TWVKPGDRKL LQSSSLASQA NIVVSKDGSG DYTTIGAAIT AASKRSGSGR YVIYVKAGTY 240 SENVQIGSGL KNIMLLGDGI GKTIVTGSKS VGGGSTTFNS ATVAVVGDGF IARGMTFRNT 300 AGASNHQAVA LRSGSDLSVY YQCSFEGYQD TLYTYSERQF YRECDIYGTV DFIFGNAAVV 360 FQNCNIYVRN PPNKINTVTA QGRTDPNQNT GISIHDCKVT AASDLKAIYT LCAQK* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02314 | PLN02314 | 2.0e-108 | 24 | 407 | 421 | + pectinesterase | ||
| PLN02301 | PLN02301 | 1.0e-108 | 28 | 408 | 401 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02170 | PLN02170 | 9.0e-110 | 33 | 403 | 387 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02995 | PLN02995 | 9.0e-119 | 23 | 408 | 402 | + Probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 9.0e-121 | 201 | 408 | 209 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN78759.1 | 0 | 17 | 408 | 18 | 409 | hypothetical protein [Vitis vinifera] |
| EMBL | CAN83663.1 | 0 | 22 | 408 | 22 | 408 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI24286.1 | 0 | 1 | 415 | 1 | 415 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002265599.1 | 0 | 22 | 408 | 22 | 408 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002265740.1 | 0 | 19 | 408 | 187 | 576 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 201 | 408 | 8 | 215 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 200 | 408 | 3 | 211 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 2e-18 | 197 | 370 | 28 | 221 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 1qjv_B | 4e-17 | 197 | 404 | 1 | 232 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 4e-17 | 197 | 404 | 1 | 232 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Signal Peptide | ||||
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| Cleavage Site | ||||
| 20 | ||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DY292300 | 365 | 23 | 386 | 0 |
| FC895372 | 311 | 23 | 333 | 0 |
| DY263389 | 367 | 22 | 387 | 0 |
| EL455969 | 302 | 75 | 374 | 0 |
| FQ475933 | 241 | 22 | 262 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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