| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.013G221800.2 |
| Family | CE8 |
| Protein Properties | Length: 396 Molecular Weight: 43194.2 Isoelectric Point: 8.4594 |
| Chromosome | Chromosome/Scaffold: 13 Start: 54174451 End: 54176280 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 215 | 395 | 0 |
| VTVAVDGTGNFSTIGDAIRFAPNKSKERVMIYVREGVYEENVVIPSCKTNIVLIGDGSEVTFITGNRSVVDGWTTFRSATLAVSGEGFLARDITIQNRAG PEKHQAVALRVSADLAAFYRCTFNGYQDTLYVHSFRQFYRECNISGTIDYIFGNAAAVFQACNIISRMPMPGQFTVITAQS | |||
| Full Sequence |
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| Protein Sequence Length: 396 Download |
| MASSSKAISI LFITIFFSST LGLNISSTNS LSPNLTSIQS ICQSTPYPDS CFDSLKLSIS 60 INISPDILTY LLQTLHTALS EATKLTNLFS NGGNSNDIVE KQRGTLQDCK ELHETTLSIL 120 EKTVSSIKDG DSKKLADARV YLSAALTNKN TCLEGLDSAL GPLKPVMVKS LIGTYKHVSN 180 SLSMLPKLGK RHRNRRLSCR VLRGVDDEYN PREVVTVAVD GTGNFSTIGD AIRFAPNKSK 240 ERVMIYVREG VYEENVVIPS CKTNIVLIGD GSEVTFITGN RSVVDGWTTF RSATLAVSGE 300 GFLARDITIQ NRAGPEKHQA VALRVSADLA AFYRCTFNGY QDTLYVHSFR QFYRECNISG 360 TIDYIFGNAA AVFQACNIIS RMPMPGQFTV ITAQS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03043 | PLN03043 | 4.0e-98 | 42 | 394 | 410 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
| PLN02314 | PLN02314 | 3.0e-102 | 39 | 395 | 394 | + pectinesterase | ||
| PLN02713 | PLN02713 | 2.0e-106 | 40 | 394 | 406 | + Probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 5.0e-117 | 215 | 395 | 181 | + Pectinesterase. | ||
| PLN02416 | PLN02416 | 0 | 40 | 395 | 370 | + probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAH56489.1 | 0 | 1 | 395 | 1 | 414 | pectin methylesterase 1 [Prunus persica] |
| RefSeq | NP_180212.1 | 0 | 30 | 395 | 29 | 418 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002273535.1 | 0 | 2 | 395 | 3 | 400 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002326320.1 | 0 | 15 | 395 | 16 | 408 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516192.1 | 0 | 31 | 395 | 37 | 414 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 217 | 395 | 7 | 185 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0 | 215 | 394 | 9 | 188 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1qjv_B | 3e-20 | 225 | 381 | 18 | 193 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 3e-20 | 225 | 381 | 18 | 193 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 3e-20 | 225 | 381 | 18 | 193 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Transmembrane Domains | ||||
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| Start | End | |||
| 7 | 26 | |||
| Signal Peptide | ||||
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| Cleavage Site | ||||
| 22 | ||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| CK287615 | 313 | 39 | 333 | 0 |
| JG622622 | 280 | 98 | 363 | 0 |
| GR714237 | 179 | 84 | 262 | 0 |
| GR714237 | 45 | 39 | 83 | 0 |
| FG610488 | 266 | 146 | 393 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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