Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.002G120000.1 |
Family | AA1 |
Protein Properties | Length: 542 Molecular Weight: 60278.2 Isoelectric Point: 9.6445 |
Chromosome | Chromosome/Scaffold: 02 Start: 17183103 End: 17186869 |
Description | SKU5 similar 5 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 46 | 496 | 0 |
TGILINGQFPGPDIHSVTNDNLIINVHNSLNEPFLISWSGIQQRRNSYEDGVYGTTCPIPPGKNFTYILQVKDQIGSFFYFPSLAFHKAAGGFGGIRILS RPRIPVPFPDPAGDYTVLIGDWYKSNHTNLKARLDRGKKLPFPDGILINGRGPGGASFNVEQGKTYRLRISNVGLQNSLNFRIQNHRLTLVEVEGTHTLQ TTYSSIDLHLGQSCSVLFKADQPAKDYYIAVSTRFTSRVLTSTAILRYSNSAGPVSGPPPGGPTIQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGLIN TTKTIRLANSAGQVNGKQRYAVNSVSFVPEDTPLKLADYFKIGGVFRVGSISDNPYGGKIYLDTSVMQADYRAFIEIVFQNNENIVQSWHLDGYSFFVVG MDGGQWTTASRREYNLRDAVSRCTTQVYPKSWTAIYVALDNVGMWNLRSEF |
Full Sequence |
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Protein Sequence Length: 542 Download |
MQLHLAVVLL CATSGLFANA GAEDPYRFFD WNVTFGDIYP LGVRQTGILI NGQFPGPDIH 60 SVTNDNLIIN VHNSLNEPFL ISWSGIQQRR NSYEDGVYGT TCPIPPGKNF TYILQVKDQI 120 GSFFYFPSLA FHKAAGGFGG IRILSRPRIP VPFPDPAGDY TVLIGDWYKS NHTNLKARLD 180 RGKKLPFPDG ILINGRGPGG ASFNVEQGKT YRLRISNVGL QNSLNFRIQN HRLTLVEVEG 240 THTLQTTYSS IDLHLGQSCS VLFKADQPAK DYYIAVSTRF TSRVLTSTAI LRYSNSAGPV 300 SGPPPGGPTI QIDWSLNQAR SIRTNLTASG PRPNPQGSYH YGLINTTKTI RLANSAGQVN 360 GKQRYAVNSV SFVPEDTPLK LADYFKIGGV FRVGSISDNP YGGKIYLDTS VMQADYRAFI 420 EIVFQNNENI VQSWHLDGYS FFVVGMDGGQ WTTASRREYN LRDAVSRCTT QVYPKSWTAI 480 YVALDNVGMW NLRSEFWARQ YLGQQFYLRV YTTSTSLRDE YPIPKNALLC GRASGRHTRP 540 L* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02991 | PLN02991 | 0 | 16 | 538 | 523 | + oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 22 | 538 | 520 | + oxidoreductase | ||
PLN02835 | PLN02835 | 0 | 1 | 538 | 538 | + oxidoreductase | ||
PLN02354 | PLN02354 | 0 | 1 | 535 | 543 | + copper ion binding / oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 25 | 534 | 521 | + copper ion binding / pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACJ85585.1 | 0 | 1 | 541 | 1 | 544 | unknown [Medicago truncatula] |
RefSeq | XP_002282214.1 | 0 | 7 | 541 | 8 | 542 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002307765.1 | 0 | 1 | 541 | 1 | 548 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510630.1 | 0 | 1 | 541 | 1 | 546 | multicopper oxidase, putative [Ricinus communis] |
RefSeq | XP_002528421.1 | 0 | 22 | 541 | 25 | 544 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 27 | 531 | 4 | 539 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1asq_A | 0 | 27 | 531 | 4 | 539 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1asp_B | 0 | 27 | 531 | 4 | 539 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1asp_A | 0 | 27 | 531 | 4 | 539 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1aso_B | 0 | 27 | 531 | 4 | 539 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |