Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.009G194300.1 |
Family | AA1 |
Protein Properties | Length: 546 Molecular Weight: 61456.9 Isoelectric Point: 5.251 |
Chromosome | Chromosome/Scaffold: 09 Start: 14945175 End: 14947572 |
Description | SKU5 similar 18 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 49 | 496 | 0 |
QVIVINGMFPGPVLYASTNDVVNVNIHNNLTEPFLMTWNGVQMRKNSWQDGVQETNCPILPGQNWTYSFQLKDQIGSFFYFPSLLLHKAAGGYGAIHLNN LPIIPIPFPQPYKDYAVLIGDWFNADYRDLRASLENGVFLPHPDGILINGLGPNQARFEFEPSATYMLRISNVGLKTSLNFRIEDHPMLLVETEGSYLIQ QYYDSLDIHVGQSYSVLVTAKNQANGKSYYMVASSRFTILEHSGIGVIHYPDAAGDPVGPLPLGPGLSNYNFSIEQARSMRWDLIASAARPNPQGSYHYG TIPITRTLILENNVMVIGSKRRFTINGISFMHSDTPLKLLDYFQLNEESKYAAAAALPSSATSVVDAFYRDFFHIVFQNPLLEVQSWHIDGYNFFVVGMG WGLWDESKKAGYNIVDAVSRSTVQVYPLSWTAILMELDNLGTWNLRSQ |
Full Sequence |
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Protein Sequence Length: 546 Download |
MNPIRLLTSS ELCLCTCFLL VLIYRGWSQL FYDWTVSYSQ LAPLGVDKQV IVINGMFPGP 60 VLYASTNDVV NVNIHNNLTE PFLMTWNGVQ MRKNSWQDGV QETNCPILPG QNWTYSFQLK 120 DQIGSFFYFP SLLLHKAAGG YGAIHLNNLP IIPIPFPQPY KDYAVLIGDW FNADYRDLRA 180 SLENGVFLPH PDGILINGLG PNQARFEFEP SATYMLRISN VGLKTSLNFR IEDHPMLLVE 240 TEGSYLIQQY YDSLDIHVGQ SYSVLVTAKN QANGKSYYMV ASSRFTILEH SGIGVIHYPD 300 AAGDPVGPLP LGPGLSNYNF SIEQARSMRW DLIASAARPN PQGSYHYGTI PITRTLILEN 360 NVMVIGSKRR FTINGISFMH SDTPLKLLDY FQLNEESKYA AAAALPSSAT SVVDAFYRDF 420 FHIVFQNPLL EVQSWHIDGY NFFVVGMGWG LWDESKKAGY NIVDAVSRST VQVYPLSWTA 480 ILMELDNLGT WNLRSQNAEN WYLGQELYIR VKGVWNWLDE QSDISARDEA PIPDNVIKCG 540 RAADL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02792 | PLN02792 | 2.0e-173 | 30 | 544 | 523 | + oxidoreductase | ||
PLN02991 | PLN02991 | 5.0e-175 | 31 | 543 | 518 | + oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 32 | 541 | 517 | + copper ion binding / pectinesterase | ||
PLN02354 | PLN02354 | 0 | 30 | 545 | 529 | + copper ion binding / oxidoreductase | ||
PLN02835 | PLN02835 | 0 | 31 | 542 | 517 | + oxidoreductase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF87105.1 | 0 | 12 | 542 | 9 | 497 | AC006434_1 F10A5.2 [Arabidopsis thaliana] |
GenBank | AAM67203.1 | 0 | 4 | 542 | 1 | 544 | pectinesterase, putative [Arabidopsis thaliana] |
GenBank | ABK28469.1 | 0 | 12 | 542 | 9 | 543 | unknown [Arabidopsis thaliana] |
RefSeq | NP_177707.1 | 0 | 4 | 542 | 1 | 544 | sks18 (SKU5 Similar 18); copper ion binding / pectinesterase [Arabidopsis thaliana] |
RefSeq | XP_002300700.1 | 0 | 30 | 545 | 22 | 541 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 1.4013e-45 | 32 | 543 | 6 | 542 | A Chain A, Crystal Structure Of The Gain And Hormr Domains Of Brain Angiogenesis Inhibitor 3 (Bai3) |
PDB | 1asq_A | 1.4013e-45 | 32 | 543 | 6 | 542 | A Chain A, Crystal Structure Of The Gain And Hormr Domains Of Brain Angiogenesis Inhibitor 3 (Bai3) |
PDB | 1asp_B | 1.4013e-45 | 32 | 543 | 6 | 542 | A Chain A, Crystal Structure Of The Gain And Hormr Domains Of Brain Angiogenesis Inhibitor 3 (Bai3) |
PDB | 1asp_A | 1.4013e-45 | 32 | 543 | 6 | 542 | A Chain A, Crystal Structure Of The Gain And Hormr Domains Of Brain Angiogenesis Inhibitor 3 (Bai3) |
PDB | 1aso_B | 1.4013e-45 | 32 | 543 | 6 | 542 | A Chain A, Crystal Structure Of The Gain And Hormr Domains Of Brain Angiogenesis Inhibitor 3 (Bai3) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO796073 | 520 | 50 | 545 | 0 |
HO801725 | 448 | 103 | 542 | 0 |
DY262568 | 332 | 62 | 393 | 0 |
EC919612 | 305 | 48 | 352 | 0 |
EY902768 | 224 | 48 | 271 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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