Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.002G257100.1 |
Family | AA1 |
Protein Properties | Length: 574 Molecular Weight: 63841.9 Isoelectric Point: 8.4452 |
Chromosome | Chromosome/Scaffold: 02 Start: 61888799 End: 61893250 |
Description | laccase 17 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 28 | 559 | 0 |
ETRHYTFNIRYHNVTRLCHTRTILSVNRRYPGPPLVAREGDRVIVKVVNHVANNVSIHWHGIRQLTTGWSDGPSYVTQCPIQTNQSYIYNFTITGQRGTL LWHAHISWLRATIHGPIIILPKLNQSYPFQKPHKEVTIILGEWFNEDPEAIISQALRTGGGPNVSDAYTINGLPGLLYNCSSKDTYKLKVKPGKTYLLRL INAALNDELFFTIANHTLTVVEGDAIYTKPFDTDKLLITPGQTTNVLLKTKPEYPNATFLIAARPYSTGQGTFDNSTTMGVLEYEHPFKKPSKNPTLIQP NLPQINDTQFVSNFTMKFRSLANDEFPANVPKTVDKRFFFTVGLGTSPCPKNTTCQGPTNSTKFAASVNNVSFTLPSVAILQAYYFGQSNGVYTTDFPVE PMVRFNYTGIAPNNTNVMNGTRTVVLPFNTSVELVMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPVKDPAKFNLVDPMERNTAGVPAGGWIAIRFLA DNPGVWFMHCHLDVHTSWGLKMAWLVLDGPEP |
Full Sequence |
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Protein Sequence Length: 574 Download |
MAETSHLSSM AMLFISFFVV LMGNAEGETR HYTFNIRYHN VTRLCHTRTI LSVNRRYPGP 60 PLVAREGDRV IVKVVNHVAN NVSIHWHGIR QLTTGWSDGP SYVTQCPIQT NQSYIYNFTI 120 TGQRGTLLWH AHISWLRATI HGPIIILPKL NQSYPFQKPH KEVTIILGEW FNEDPEAIIS 180 QALRTGGGPN VSDAYTINGL PGLLYNCSSK DTYKLKVKPG KTYLLRLINA ALNDELFFTI 240 ANHTLTVVEG DAIYTKPFDT DKLLITPGQT TNVLLKTKPE YPNATFLIAA RPYSTGQGTF 300 DNSTTMGVLE YEHPFKKPSK NPTLIQPNLP QINDTQFVSN FTMKFRSLAN DEFPANVPKT 360 VDKRFFFTVG LGTSPCPKNT TCQGPTNSTK FAASVNNVSF TLPSVAILQA YYFGQSNGVY 420 TTDFPVEPMV RFNYTGIAPN NTNVMNGTRT VVLPFNTSVE LVMQDTSILG AESHPLHLHG 480 FNFFVVGQGF GNFDPVKDPA KFNLVDPMER NTAGVPAGGW IAIRFLADNP GVWFMHCHLD 540 VHTSWGLKMA WLVLDGPEPN QKLQPPPSDL PQC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 4.0e-49 | 35 | 149 | 117 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 2.0e-61 | 19 | 547 | 559 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 1.0e-79 | 10 | 547 | 567 | + oxidoreductase | ||
TIGR03388 | ascorbase | 8.0e-84 | 29 | 547 | 552 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 27 | 573 | 548 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAA74105.1 | 0 | 7 | 573 | 13 | 580 | laccase [Populus trichocarpa] |
EMBL | CBI31651.1 | 0 | 5 | 573 | 514 | 1094 | unnamed protein product [Vitis vinifera] |
EMBL | CBI31651.1 | 0 | 25 | 504 | 20 | 504 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002308164.1 | 0 | 7 | 573 | 13 | 580 | laccase 110b [Populus trichocarpa] |
RefSeq | XP_002531565.1 | 0 | 5 | 573 | 4 | 577 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 28 | 547 | 2 | 517 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1asq_A | 0 | 28 | 547 | 2 | 517 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1asp_B | 0 | 28 | 547 | 2 | 517 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1asp_A | 0 | 28 | 547 | 2 | 517 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1aso_B | 0 | 28 | 547 | 2 | 517 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |