Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00052830m |
Family | AA1 |
Protein Properties | Length: 602 Molecular Weight: 65347 Isoelectric Point: 8.2247 |
Chromosome | Chromosome/Scaffold: 0113894 Start: 310 End: 2717 |
Description | laccase 5 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 32 | 583 | 0 |
RFYEFVVQETLVKRLCKAQKIITVNGQFPGPTVEVYNGDTVAIKAVNLAPYNVTLHWHGLRQLRNGWADGPEFVTQCPIRPGGSYTYRFTIQDQEGTLWW HAHSSWLRATVHGALIIHPRRGLPYPFPKPHKEFPVLLAEWWRRDPIAVLRQSMITGAPPNVSDALLINGQPGDFLPCSSQETSIIPVVAGETSLLRIIN AAMNTELFVSLAGHRMTVVAADAMYTKPFETTVVLLGPGQTTDVLVTAHAAPGRYYLAARAYASAQGVPFDNTTATAIFQYKNAPGCPTTAGAGAGAFNG PVGRSSARSSSGSHLGRTGPPPMLPFLPAFNDTSTATAFSNSIRSPEMVKVPGPVTQEVFTTVGFGLFNCRPGPFCQGPNNTRFGASMNNVSFQLPNTVS LLQAHYHRIPGVFTDDFPPFPPVLFDFTSRNVPRALWQPVKGTRLYRVKFGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGFGNYDPRRDAARFNLV DPPSRNTIGVPVGGWAVVRFVADNPGVWLVHCHIDAHLTGGLAMALLVEDGE |
Full Sequence |
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Protein Sequence Length: 602 Download |
MARSSGLVKL LCSSALLLLC CFLLPSALAE ERFYEFVVQE TLVKRLCKAQ KIITVNGQFP 60 GPTVEVYNGD TVAIKAVNLA PYNVTLHWHG LRQLRNGWAD GPEFVTQCPI RPGGSYTYRF 120 TIQDQEGTLW WHAHSSWLRA TVHGALIIHP RRGLPYPFPK PHKEFPVLLA EWWRRDPIAV 180 LRQSMITGAP PNVSDALLIN GQPGDFLPCS SQETSIIPVV AGETSLLRII NAAMNTELFV 240 SLAGHRMTVV AADAMYTKPF ETTVVLLGPG QTTDVLVTAH AAPGRYYLAA RAYASAQGVP 300 FDNTTATAIF QYKNAPGCPT TAGAGAGAFN GPVGRSSARS SSGSHLGRTG PPPMLPFLPA 360 FNDTSTATAF SNSIRSPEMV KVPGPVTQEV FTTVGFGLFN CRPGPFCQGP NNTRFGASMN 420 NVSFQLPNTV SLLQAHYHRI PGVFTDDFPP FPPVLFDFTS RNVPRALWQP VKGTRLYRVK 480 FGAVVQIVFQ DTGIFAAEEH PMHIHGYHFY VLATGFGNYD PRRDAARFNL VDPPSRNTIG 540 VPVGGWAVVR FVADNPGVWL VHCHIDAHLT GGLAMALLVE DGESQLEATV APPPDLPICV 600 L* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07731 | Cu-oxidase_2 | 7.0e-38 | 460 | 583 | 124 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
pfam07732 | Cu-oxidase_3 | 9.0e-52 | 37 | 153 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02604 | PLN02604 | 5.0e-66 | 47 | 582 | 567 | + oxidoreductase | ||
TIGR03388 | ascorbase | 1.0e-75 | 47 | 582 | 562 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 32 | 599 | 572 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAF11755.2 | 0 | 11 | 601 | 13 | 630 | Os03g0297900 [Oryza sativa Japonica Group] |
GenBank | EEE58886.1 | 0 | 38 | 601 | 91 | 679 | hypothetical protein OsJ_10502 [Oryza sativa Japonica Group] |
RefSeq | NP_001049841.1 | 0 | 11 | 601 | 3 | 681 | Os03g0297900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001145891.1 | 0 | 1 | 601 | 4 | 607 | hypothetical protein LOC100279407 [Zea mays] |
RefSeq | XP_002468016.1 | 0 | 1 | 601 | 5 | 600 | hypothetical protein SORBIDRAFT_01g038130 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 29 | 577 | 1 | 521 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 1asq_A | 0 | 29 | 577 | 1 | 521 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 1asp_B | 0 | 29 | 577 | 1 | 521 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 1asp_A | 0 | 29 | 577 | 1 | 521 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 1aso_B | 0 | 29 | 577 | 1 | 521 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |