| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.010G216500.1 |
| Family | GH2 |
| Protein Properties | Length: 1115 Molecular Weight: 125726 Isoelectric Point: 5.8456 |
| Chromosome | Chromosome/Scaffold: 10 Start: 58450609 End: 58461810 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH2 | 88 | 980 | 0 |
| VKSLSGYWKFLLASNPTAVPKNFYESSFQDSDWETLPVPSNWQMHGYDRPIYTNVVYPFPLDPPHVPTDNPTGCYRTYFHIPKEWKGRRILLHFEAVDSA FCAWVNGVPIGYSQDSRLPAEFEITDYCYSCDSDKKNVLSVQVFRWSDGSYLEDQDHWWLSGIHRDVLLLSKPQVFIADYFFKSNLADNFSYADIQLEVK IDCSRETPKDIVLTDFIIEAALYDAGSWYNCDGNVDLLSSNVANIELNRFPTQTLGFHGYMLEGKLENPKLWSAEHPNLYTLVIILKDASGKIVDCESCL VGIRQVSKAPKQLLVNGHPVVIRGVNRHEHHPRLGKTNIEACMVKDLVVMKQNNINAVRNSHYPQHPRWYELCDLFGMYMIDEANIETHGFDLSGHLKHP TQEPSWAAAMMDRVIGMVERDKNHACIFSWSLGNEAGYGPNHSASAGWIRGRDPSRVVHYEGGGSRTPSTDIVCPMYMRVWDVVKIAKDPNESRPLILCE YSHAMGNSCGNIHEYWEAIDNIFGLQGGFIWDWVDQALLKDNGNGSKYWAYGGDFGDSPNDLNFCLNGITWPDRTPHPTLHEVKYVYQPIKVYLRESTVK IKNTNFYETTEGLVFEWAVLGDGCELGCGILSLPVIEPQSSYDIEWKSGPWYPLGASSDAEEIFLTITTKLLHSKRWVEVGHVVSSTQVQLPSKRDIVPH IIKTKDDVLSTEILGDNIIISQSKLWEITFNTKTGSLDSWKVEGVPIMKNGLFPCFWRAPTDNDKGGGPSSYQTKWKAACIDEIVFLTESCSIQNKTDNV VKIAVVYLGFIKGEDGTLDESKKASALFKVDMLYTIHASGDIVIESNVKPSSGLPPLPRVGVEFHLEKSVDQVKWYGRGPFECYPDRKAAAHV | |||
| Full Sequence |
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| Protein Sequence Length: 1115 Download |
| MASLIVSQLG FPSENGYKVW EDQSFIKWRK RDPHVTLHCH ESVEGSLKYW YERNKVDLSV 60 SKSAVWNDDA VQSALESAAF WVKGLPFVKS LSGYWKFLLA SNPTAVPKNF YESSFQDSDW 120 ETLPVPSNWQ MHGYDRPIYT NVVYPFPLDP PHVPTDNPTG CYRTYFHIPK EWKGRRILLH 180 FEAVDSAFCA WVNGVPIGYS QDSRLPAEFE ITDYCYSCDS DKKNVLSVQV FRWSDGSYLE 240 DQDHWWLSGI HRDVLLLSKP QVFIADYFFK SNLADNFSYA DIQLEVKIDC SRETPKDIVL 300 TDFIIEAALY DAGSWYNCDG NVDLLSSNVA NIELNRFPTQ TLGFHGYMLE GKLENPKLWS 360 AEHPNLYTLV IILKDASGKI VDCESCLVGI RQVSKAPKQL LVNGHPVVIR GVNRHEHHPR 420 LGKTNIEACM VKDLVVMKQN NINAVRNSHY PQHPRWYELC DLFGMYMIDE ANIETHGFDL 480 SGHLKHPTQE PSWAAAMMDR VIGMVERDKN HACIFSWSLG NEAGYGPNHS ASAGWIRGRD 540 PSRVVHYEGG GSRTPSTDIV CPMYMRVWDV VKIAKDPNES RPLILCEYSH AMGNSCGNIH 600 EYWEAIDNIF GLQGGFIWDW VDQALLKDNG NGSKYWAYGG DFGDSPNDLN FCLNGITWPD 660 RTPHPTLHEV KYVYQPIKVY LRESTVKIKN TNFYETTEGL VFEWAVLGDG CELGCGILSL 720 PVIEPQSSYD IEWKSGPWYP LGASSDAEEI FLTITTKLLH SKRWVEVGHV VSSTQVQLPS 780 KRDIVPHIIK TKDDVLSTEI LGDNIIISQS KLWEITFNTK TGSLDSWKVE GVPIMKNGLF 840 PCFWRAPTDN DKGGGPSSYQ TKWKAACIDE IVFLTESCSI QNKTDNVVKI AVVYLGFIKG 900 EDGTLDESKK ASALFKVDML YTIHASGDIV IESNVKPSSG LPPLPRVGVE FHLEKSVDQV 960 KWYGRGPFEC YPDRKAAAHV GVYEQSIEGM HVPYIVPGES GGRADVRWVT FQNKDGCGIY 1020 ASTYGKSPPM QLNASYFSTA ELDRAVRNEE LIKGDTIEVH LDHKHMGIGG DDSWTPSVHE 1080 NYLVPAVPYS FSIRLCPVTS ATSGQNLYRS QLQN* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart01038 | Bgal_small_N | 1.0e-92 | 813 | 1095 | 284 | + Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase. | ||
| pfam02836 | Glyco_hydro_2_C | 1.0e-107 | 397 | 678 | 292 | + Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| COG3250 | LacZ | 5.0e-164 | 88 | 978 | 896 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| PRK09525 | lacZ | 0 | 86 | 1097 | 1051 | + beta-D-galactosidase; Reviewed | ||
| PRK10340 | ebgA | 0 | 89 | 1098 | 1014 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002266400.1 | 0 | 1 | 1114 | 1 | 1114 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002266434.1 | 0 | 1 | 1114 | 1 | 1115 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
| RefSeq | XP_002299206.1 | 0 | 1 | 1114 | 1 | 1110 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002303929.1 | 0 | 1 | 1114 | 1 | 1113 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002513059.1 | 0 | 1 | 1114 | 1 | 1110 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1f4h_D | 0 | 88 | 1096 | 49 | 1019 | A Chain A, Crystal Structure Of Puromycin Hydrolase S511a Mutant |
| PDB | 1f4h_C | 0 | 88 | 1096 | 49 | 1019 | A Chain A, Crystal Structure Of Puromycin Hydrolase S511a Mutant |
| PDB | 1f4h_B | 0 | 88 | 1096 | 49 | 1019 | A Chain A, Crystal Structure Of Puromycin Hydrolase S511a Mutant |
| PDB | 1f4h_A | 0 | 88 | 1096 | 49 | 1019 | A Chain A, Crystal Structure Of Puromycin Hydrolase S511a Mutant |
| PDB | 1f4a_D | 0 | 88 | 1096 | 49 | 1019 | A Chain A, E. Coli (Lacz) Beta-Galactosidase (Ncs Constrained Monomer- Orthorhombic) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| ES794486 | 406 | 452 | 852 | 0 |
| DW517824 | 301 | 762 | 1062 | 0 |
| CO122111 | 294 | 651 | 944 | 0 |
| HO804274 | 385 | 130 | 511 | 0 |
| HO804274 | 50 | 502 | 550 | 0.00000001 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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