| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr8g039160.1 |
| Family | GH2 |
| Protein Properties | Length: 1119 Molecular Weight: 126074 Isoelectric Point: 5.9959 |
| Chromosome | Chromosome/Scaffold: 8 Start: 9509507 End: 9518062 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH2 | 91 | 982 | 0 |
| FVKSLSGYWKFFLASNPCNVPAKFHDSEFQDSEWSTLPVPSNWQLHGFDRPIYTNVTYPFPLDPPFVPTENPTGCYRMDFHLPKEWEGRRILLHFEAVDS AFCAWINGHPIGYSQDSRLPAEFEVTDFCHPCGSDLKNVLAVQVFRWSDGCYLEDQDHWRMSGIHRDVLLLAKPEVFITDYFFKSNLAEDFSSAEMLVEV KIDRLQDTSIDNVLTNYTIEATLYDSGSWESSDGNPDLLSSNVADITFQPTTTPLGFYGYTLVGKLQSPKLWSAEQPYLYTLVVVLKDKSGRVLDCESSQ VGFKNVSKAHKQLLVNGHPVVIRGVNRHEHHPEVGKANIESCMVKDLVLMKQNNINAVRNSHYPQHPRWYELCDLFGMYMIDEANIETHGFDYSKHLKHP TLEPMWATAMLDRVIGMVERDKNHTCIISWSLGNESGFGTNHFAMAGWIRGRDSSRVIHYEGGGSRTPCTDIVCPMYMRVWDMLKIANDPTETRPLILCE YSHAMGNSNGNLHIYWEAIDNTFGLQGGFIWDWVDQALRKVQADGTKQWAYGGEFGDIPNDLNFCLNGLVWPDRTAHPVLHEVKFLYQPIKVNLSDGKLE IKNTHFFQTTEGLEFSWYISADGYKLGSDKLSLPPIKPQSNYVFDWKSGPWYSLWDSSSSEEIFLTITAKLLNSTRWVEAGHVVTTAQVQLPAKRDIVPH AINIGSGNLVVETLGDTIKVSQQDVWDITFNTKTGLIESWKVKGVHVMNKGIHPCFWRASIDNDKGGGADSYLSRWKAAGIDSVHFIAESCSVQSTTGNA VKLLVVFHGVTKGEEGSLPNQDKSKVLFTTEMTYTIYASGDVILECNVKPNADLPPLPRVGIEMNLEKSLDQVSWYGRGPFECYPDRKAAAQ | |||
| Full Sequence |
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| Protein Sequence Length: 1119 Download |
| MASSPSSSLV GPLLLAPNNG YKVWEDPSFI KWRKRDPHVH LHCHESVEGS LKYWYQRSKV 60 DYLVSQSAVW KDDAVNGALE SAAFWVKDLP FVKSLSGYWK FFLASNPCNV PAKFHDSEFQ 120 DSEWSTLPVP SNWQLHGFDR PIYTNVTYPF PLDPPFVPTE NPTGCYRMDF HLPKEWEGRR 180 ILLHFEAVDS AFCAWINGHP IGYSQDSRLP AEFEVTDFCH PCGSDLKNVL AVQVFRWSDG 240 CYLEDQDHWR MSGIHRDVLL LAKPEVFITD YFFKSNLAED FSSAEMLVEV KIDRLQDTSI 300 DNVLTNYTIE ATLYDSGSWE SSDGNPDLLS SNVADITFQP TTTPLGFYGY TLVGKLQSPK 360 LWSAEQPYLY TLVVVLKDKS GRVLDCESSQ VGFKNVSKAH KQLLVNGHPV VIRGVNRHEH 420 HPEVGKANIE SCMVKDLVLM KQNNINAVRN SHYPQHPRWY ELCDLFGMYM IDEANIETHG 480 FDYSKHLKHP TLEPMWATAM LDRVIGMVER DKNHTCIISW SLGNESGFGT NHFAMAGWIR 540 GRDSSRVIHY EGGGSRTPCT DIVCPMYMRV WDMLKIANDP TETRPLILCE YSHAMGNSNG 600 NLHIYWEAID NTFGLQGGFI WDWVDQALRK VQADGTKQWA YGGEFGDIPN DLNFCLNGLV 660 WPDRTAHPVL HEVKFLYQPI KVNLSDGKLE IKNTHFFQTT EGLEFSWYIS ADGYKLGSDK 720 LSLPPIKPQS NYVFDWKSGP WYSLWDSSSS EEIFLTITAK LLNSTRWVEA GHVVTTAQVQ 780 LPAKRDIVPH AINIGSGNLV VETLGDTIKV SQQDVWDITF NTKTGLIESW KVKGVHVMNK 840 GIHPCFWRAS IDNDKGGGAD SYLSRWKAAG IDSVHFIAES CSVQSTTGNA VKLLVVFHGV 900 TKGEEGSLPN QDKSKVLFTT EMTYTIYASG DVILECNVKP NADLPPLPRV GIEMNLEKSL 960 DQVSWYGRGP FECYPDRKAA AQVAVYEKSV DELHVPYIVP GESGGRADVR WATFLNKNGF 1020 GIYTSKYGSS PPMQMSASYY STSELDRAGH DYELVKGDNI EVHLDHKHMG LGGDDSWSPC 1080 VHDQYLVPPV PYSFSVRLSP VTPATSGHDI YRSQLQNS* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart01038 | Bgal_small_N | 5.0e-97 | 818 | 1098 | 282 | + Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase. | ||
| pfam02836 | Glyco_hydro_2_C | 9.0e-103 | 401 | 681 | 291 | + Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| COG3250 | LacZ | 3.0e-158 | 92 | 982 | 895 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| PRK09525 | lacZ | 0 | 90 | 1100 | 1041 | + beta-D-galactosidase; Reviewed | ||
| PRK10340 | ebgA | 0 | 78 | 1101 | 1031 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002266400.1 | 0 | 7 | 1117 | 2 | 1114 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002266434.1 | 0 | 7 | 1117 | 2 | 1115 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
| RefSeq | XP_002299206.1 | 0 | 7 | 1117 | 2 | 1110 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002303929.1 | 0 | 7 | 1117 | 2 | 1113 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002513059.1 | 0 | 3 | 1117 | 2 | 1110 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1f4h_D | 0 | 92 | 1096 | 49 | 1016 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1f4h_C | 0 | 92 | 1096 | 49 | 1016 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1f4h_B | 0 | 92 | 1096 | 49 | 1016 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1f4h_A | 0 | 92 | 1096 | 49 | 1016 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1f4a_D | 0 | 92 | 1096 | 49 | 1016 | A Chain A, E. Coli (Lacz) Beta-Galactosidase (Ncs Constrained Monomer- Orthorhombic) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO804274 | 385 | 134 | 514 | 0 |
| EX524351 | 263 | 856 | 1118 | 0 |
| EL444301 | 297 | 442 | 738 | 0 |
| ES794486 | 309 | 455 | 763 | 0 |
| HO804274 | 50 | 505 | 553 | 0.0000000000002 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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