| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os08g10310.3 |
| Family | CBM57 |
| Protein Properties | Length: 672 Molecular Weight: 72809.2 Isoelectric Point: 8.4351 |
| Chromosome | Chromosome/Scaffold: 8 Start: 6015745 End: 6023280 |
| Description | Leucine-rich repeat transmembrane protein kinase |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM57 | 425 | 595 | 5.6e-27 |
| FAVDCGSNRSIRVSDNTMYELDSTNLGDSSYYVTSQTRWGVSNVGKLFQAPNDSKIIHSGEKIQNAVDSELFQTARMSPSSLRYYGLGLENGNYTVLLKF AELGFPDTPTWQSLGRRFFDIYIQGELKEKDFNIRKMAGGKSFTAVYKSYTTTVSKNFLEIHLFWAGKGTC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 672 Download |
| MGGVSGKLVW VLLVMCSSWL IAAVHAQQAA TTDPIEVAAL EAILGRWGKT TSPLWRMSGE 60 PCRGVPVDGS TDLDGNPKNN PGIKCDCSYN SGTVCHITQL RVYALNVVGQ IPAELQNLTY 120 LTYLNLDQNY LSGPIPSFIG QLTALTELHV GFNPLSGSLP KELGNLTNLN LLGISLTNFS 180 GQLPEELGNL TKLRQLYTDS AGLSGPFPST LSRLKNLKLL RASDNNFTGT IPDFIGSLSN 240 LEDLAFQGNS FEGPIPASLS NLTKLTTLRI GDIVNGSSSL AFISSLTSLD TLVLRNCKIS 300 GDLGAVDFSK FANLTFLDLS FNNISGNVPK SILNLQKLIF LFLGNNSLTG ELPDGISPSL 360 TNLDFSYNQL TGSFPSWVTQ NNLQLNLVAN NFILGSTNIG MLPPGLNCLQ EDTPCFRGSP 420 KYYSFAVDCG SNRSIRVSDN TMYELDSTNL GDSSYYVTSQ TRWGVSNVGK LFQAPNDSKI 480 IHSGEKIQNA VDSELFQTAR MSPSSLRYYG LGLENGNYTV LLKFAELGFP DTPTWQSLGR 540 RFFDIYIQGE LKEKDFNIRK MAGGKSFTAV YKSYTTTVSK NFLEIHLFWA GKGTCCIPIQ 600 GYYGPLISAL SITPNFSPTV RNGVPKKKSK AGAIVGIVIA ASVLGSAILF GIFMVIKKRR 660 RMAKQQEGNS F* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00113 | PLN00113 | 3.0e-11 | 99 | 270 | 172 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 3.0e-23 | 91 | 375 | 316 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 2.0e-23 | 100 | 375 | 280 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 8.0e-31 | 107 | 379 | 275 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 5.0e-59 | 423 | 610 | 189 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000166 | nucleotide binding |
| GO:0005515 | protein binding |
| GO:0005886 | plasma membrane |
| GO:0006464 | cellular protein modification process |
| GO:0016301 | kinase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAY67902.1 | 0 | 2 | 667 | 10 | 670 | SHR5-receptor-like kinase [Saccharum hybrid cultivar SP70-1143] |
| GenBank | EEC78858.1 | 0 | 18 | 667 | 24 | 670 | hypothetical protein OsI_19210 [Oryza sativa Indica Group] |
| GenBank | EEE68221.1 | 0 | 1 | 667 | 1 | 628 | hypothetical protein OsJ_26393 [Oryza sativa Japonica Group] |
| RefSeq | NP_001061223.1 | 0 | 1 | 667 | 1 | 667 | Os08g0203400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001061225.1 | 0 | 8 | 667 | 11 | 666 | Os08g0203700 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rj0_A | 2e-29 | 108 | 379 | 404 | 698 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 3rj0_A | 0.000000000000008 | 96 | 376 | 176 | 433 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 3rj0_A | 0.00000000001 | 95 | 208 | 610 | 718 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 3rj0_A | 0.0000002 | 80 | 234 | 577 | 720 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 3rj0_A | 0.000009 | 92 | 256 | 508 | 718 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
