| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g002562m |
| Family | CBM57 |
| Protein Properties | Length: 908 Molecular Weight: 99398.6 Isoelectric Point: 5.7124 |
| Chromosome | Chromosome/Scaffold: 00008 Start: 2135576 End: 2146685 |
| Description | Leucine-rich repeat transmembrane protein kinase |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM57 | 430 | 596 | 5.5e-28 |
| SIKCGGKQMRADNIVYEADNSSLSASSYAVTNTEKWGVSNVGFFYERENPAYVLNTLGQVTGTRTPELYQTSRISPGSLRYYGLGLENGPYNVSLLFAET NILDRSTERWESLARRVFDIYIQGTLRWKDFDISKEAGGPNRAIIKNFNATVSENHLEIHLFWAGKG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 908 Download |
| MNFGVGSVKL LLSLLLLLFA HLFLLIGLSE AQNNTTSTTD PAEVRALNSI LQQWDAPAVP 60 LWNISGEPCS GSALNATDSE FESPNNNPAI VCDCTFDNGA TCHITKLRVY ALNKKGVIPE 120 ELVTLQYLTF LKIDQNFFTG PLPSFIGNLS RLMLLSVAHN VFSGSVPREL GNLKELTVLS 180 FGNNNFSGTL PPEIGNLAKL EQLYLNSWGA GGEIPSTYAK LRNMQTLWAS DAPFTGKIPD 240 FIGNWTKLKS LRFQGNSFQG PIPSSLSKLA SLDSLRISDI YNVSSSLDFV MSLKNLTDLS 300 LRNALITGSI PSGIGELQNL QTLDLSFNNL TGQIPRTLFN IGSLNYLFLG NNSLSGTLPT 360 QKSENLQNID LSYNHLSGPF PSWVTSNLQM NLVANNFTFD RSNISVFPGL HCLQRNFPCN 420 RNAPRYANFS IKCGGKQMRA DNIVYEADNS SLSASSYAVT NTEKWGVSNV GFFYERENPA 480 YVLNTLGQVT GTRTPELYQT SRISPGSLRY YGLGLENGPY NVSLLFAETN ILDRSTERWE 540 SLARRVFDIY IQGTLRWKDF DISKEAGGPN RAIIKNFNAT VSENHLEIHL FWAGKGTCCV 600 PKQGDYGPAI SALSVVSAFK PSVSGLPPST AGNKNHTGLI VGIAVPLGIL GLIAISIVFY 660 MRRKKDNDDE EVLVGIDSKP NTFSYAELRS ATQDFDPSNK LGEGGYGPVY KKTQLMLSNF 720 HGYLAPEYAM RGHLTEKADV FSFGVAALEI ISGRANSDNS LDMEKIYLLE WAWNLHENNQ 780 SLGLVDPTLT EFNDKEALRV IGVALLCTQA SPMMRPPMSR VVAMLAGDIE VGKVISKPSY 840 LTDWDFKDIT ASFLNEDTPT PSSSIKRSNS KEKSERENPV DDHSEGTGAL VSPVNVTQLA 900 DIIAEGR* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00113 | PLN00113 | 4.0e-31 | 113 | 398 | 290 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 8.0e-32 | 116 | 382 | 293 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 3.0e-35 | 113 | 381 | 272 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 6.0e-37 | 116 | 381 | 268 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 6.0e-51 | 428 | 613 | 190 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004672 | protein kinase activity |
| GO:0005515 | protein binding |
| GO:0006468 | protein phosphorylation |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI39026.1 | 0 | 29 | 713 | 36 | 717 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI39026.1 | 0 | 700 | 907 | 838 | 1037 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002272404.1 | 0 | 44 | 713 | 3 | 674 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002297945.1 | 0 | 7 | 711 | 4 | 711 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002297945.1 | 0 | 700 | 907 | 834 | 1041 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rgz_A | 2e-25 | 99 | 382 | 220 | 532 | B Chain B, X-Ray Crystal Structure Of Ngt-Bound Hexa |
| PDB | 3rgz_A | 3e-25 | 99 | 381 | 439 | 721 | B Chain B, X-Ray Crystal Structure Of Ngt-Bound Hexa |
| PDB | 3rgz_A | 6e-20 | 131 | 398 | 399 | 717 | B Chain B, X-Ray Crystal Structure Of Ngt-Bound Hexa |
| PDB | 3rgz_A | 0.000000000005 | 128 | 398 | 102 | 381 | B Chain B, X-Ray Crystal Structure Of Ngt-Bound Hexa |
| PDB | 3rgz_A | 0.0000000007 | 112 | 256 | 594 | 737 | B Chain B, X-Ray Crystal Structure Of Ngt-Bound Hexa |
