| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10004975 |
| Family | AA1 |
| Protein Properties | Length: 303 Molecular Weight: 33178.1 Isoelectric Point: 10.0923 |
| Chromosome | Chromosome/Scaffold: 2786 Start: 154724 End: 156591 |
| Description | laccase 2 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 7 | 285 | 2.6e-39 |
| SSSVLKPVLPAINDTNAVANFSAKFRSLGSDRFPVTVPIPLTGTSCSRSVWGLALARTRTTKHHVKALMGQASINNISMPLPHSTSLLQAHYTKKSNGNF STDFPKMPLNPFNYTGNPPPINSTFVVNGTKVEVLPFNATVELVLQGTSIPGAESHPIHLHGYNFYVVGQGFRNFDLTVDVKGYHLVDPVERNTVGVPTT GWIAIRFRADNPGYYSSGFGRTLVKIRKYPNQSLIFSFGLGRTLIKIRKYPDQSSIFCEIHVGSVLMHCHFDAWIVEDG | |||
| Full Sequence |
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| Protein Sequence Length: 303 Download |
| MTGNSNSSSV LKPVLPAIND TNAVANFSAK FRSLGSDRFP VTVPIPLTGT SCSRSVWGLA 60 LARTRTTKHH VKALMGQASI NNISMPLPHS TSLLQAHYTK KSNGNFSTDF PKMPLNPFNY 120 TGNPPPINST FVVNGTKVEV LPFNATVELV LQGTSIPGAE SHPIHLHGYN FYVVGQGFRN 180 FDLTVDVKGY HLVDPVERNT VGVPTTGWIA IRFRADNPGY YSSGFGRTLV KIRKYPNQSL 240 IFSFGLGRTL IKIRKYPDQS SIFCEIHVGS VLMHCHFDAW IVEDGKLPNQ KLLPPPSDLP 300 KC* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02191 | PLN02191 | 5.0e-21 | 13 | 260 | 252 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 7.0e-23 | 79 | 222 | 152 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 6.0e-26 | 79 | 222 | 154 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| pfam07731 | Cu-oxidase_2 | 6.0e-27 | 111 | 221 | 115 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| TIGR03389 | laccase | 2.0e-90 | 2 | 302 | 313 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI30530.1 | 0 | 9 | 302 | 12 | 261 | unnamed protein product [Vitis vinifera] |
| GenBank | EEC71780.1 | 0 | 10 | 302 | 329 | 577 | hypothetical protein OsI_04394 [Oryza sativa Indica Group] |
| RefSeq | NP_001044773.1 | 0 | 10 | 302 | 329 | 577 | Os01g0842500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002282815.1 | 0 | 10 | 302 | 335 | 584 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002313424.1 | 0 | 5 | 302 | 323 | 576 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0.000000000007 | 13 | 257 | 312 | 552 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1asq_A | 0.000000000007 | 13 | 257 | 312 | 552 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1asp_B | 0.000000000007 | 13 | 257 | 312 | 552 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1asp_A | 0.000000000007 | 13 | 257 | 312 | 552 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1aso_B | 0.000000000007 | 13 | 257 | 312 | 552 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| CV230599 | 312 | 5 | 303 | 0 |
| CN550235 | 307 | 11 | 303 | 0 |
| FL699501 | 235 | 78 | 303 | 0 |
| HO799786 | 294 | 25 | 303 | 0 |
| HS108808 | 238 | 75 | 303 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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