| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10014125 |
| Family | GH35 |
| Protein Properties | Length: 757 Molecular Weight: 84240.1 Isoelectric Point: 8.9168 |
| Chromosome | Chromosome/Scaffold: 1247 Start: 507016 End: 512098 |
| Description | beta-galactosidase 14 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 81 | 270 | 0 |
| QHMERFVRMMVEKLRDANLFAEQGGPIILAQIENEYNTVQLAYRELGNKYVQWAGNLALGFNVGVPWVMCKQHDAPGPVINACNGRHCGDTFGGPNAPNK PALWTENWTAQFRVFGDPPSQRSVEDTAFAVVRWFSKNGSLVNYYMYHGGSNFARTAASFVTTRYYDEAPLDEFGLERGPKFGHLKDVHK | |||
| Full Sequence |
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| Protein Sequence Length: 757 Download |
| MASSAIAHKE KKLHKGQAVT YDAKSLIING KRELLFSGSI HYPRSTPDMW PKLLEDAKRG 60 GINVIQTYTF WNIHEPEEGK QHMERFVRMM VEKLRDANLF AEQGGPIILA QIENEYNTVQ 120 LAYRELGNKY VQWAGNLALG FNVGVPWVMC KQHDAPGPVI NACNGRHCGD TFGGPNAPNK 180 PALWTENWTA QFRVFGDPPS QRSVEDTAFA VVRWFSKNGS LVNYYMYHGG SNFARTAASF 240 VTTRYYDEAP LDEFGLERGP KFGHLKDVHK AINLCKRALL WGSPSSQRLN PDVEVRIYEQ 300 PGTDVCAAFL TNNHTRLGHT ANFKGQKYYL PPRSISVLPD CKTVVLNTAT IVAQHNSRNF 360 LKSQVANKLE WKMITETIPS DLNVTSATPM ELYFLTKDKT DYAWYTTTIN LDPRDLSMRH 420 DILPVLRVAS LGHAMLAFNN GQFIGSAHGS QIDKSFVLQK SIELKPGINK ISLLGTLVGL 480 PDSGAYMEHR FAGPRGVSIL GMNTGTLDLS QNGWGHQAGL KGEHDELFTK EGAKKAKWTN 540 IPKGGKGPPL TWYKAKFDAP EGNDPVAVSM YGMIKGMIWV NGESIGRYWM SYVSPLGQST 600 QAEYHIPRSY LKQKDNLIVV LEEESAHPRN ITIMTVNRDT ICSDVSELSP PSVRQWERKD 660 DKFRPVGTEA KLAAHLRCPH GKKISVVDFA SYGDPYGACG GFAQGRCHSP VSKQVVEQQC 720 LGKDSCDVPL EKGLFNKNGD LCPEVKKTLS VQVTCR* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1874 | LacA | 2.0e-8 | 19 | 111 | 94 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam02140 | Gal_Lectin | 6.0e-19 | 676 | 755 | 83 | + Galactose binding lectin domain. | ||
| pfam01301 | Glyco_hydro_35 | 3.0e-96 | 25 | 272 | 320 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 80 | 755 | 705 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAS76480.1 | 0 | 14 | 755 | 44 | 842 | beta-galactosidase [Gossypium hirsutum] |
| GenBank | ACC60982.1 | 0 | 17 | 755 | 26 | 826 | beta-galactosidase 2 precursor [Petunia x hybrida] |
| EMBL | CAB64750.1 | 0 | 1 | 755 | 25 | 837 | putative beta-galactosidase [Arabidopsis thaliana] |
| RefSeq | XP_002306183.1 | 0 | 5 | 755 | 21 | 826 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002312963.1 | 0 | 15 | 755 | 27 | 825 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 0.000000000004 | 25 | 268 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.0002 | 551 | 622 | 509 | 572 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 0.00000000003 | 19 | 255 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 0.002 | 513 | 650 | 503 | 630 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 0.00000000003 | 19 | 255 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO778160 | 700 | 18 | 633 | 0 |
| CO115134 | 274 | 82 | 355 | 0 |
| EE257020 | 282 | 390 | 671 | 0 |
| CO126401 | 292 | 117 | 407 | 0 |
| CO116280 | 277 | 132 | 407 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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