| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr5g022590.1 |
| Family | GH35 |
| Protein Properties | Length: 419 Molecular Weight: 48086.4 Isoelectric Point: 8.561 |
| Chromosome | Chromosome/Scaffold: 5 Start: 8650728 End: 8653794 |
| Description | glycosyl hydrolase family 35 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 6 | 267 | 0 |
| FFSFYGSVHYPRCPPEMWPDIFKKAKQFNFEGNYDLIKFIKMIGIMICMQHLELVHSLKELPIWLREIPNIIFRSDNQPFMYHMEQFTKMIIKKMRDEKF FPRKQIENEHTAVQQAYKEHGMRYVQWEGNMAVGLDTGVPWIMCKQVNALGPVMNTCNGRYCGDTFSGPNKNSHLNIHLRHYRYRAFGDPPSERTAEDIA IAVARFFSKKGTMANYYMYYGGTNFGRTSSSFVTTQYYDEAPIVEYGLPREPKWGHFRDLHD | |||
| Full Sequence |
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| Protein Sequence Length: 419 Download |
| MVKGCFFSFY GSVHYPRCPP EMWPDIFKKA KQFNFEGNYD LIKFIKMIGI MICMQHLELV 60 HSLKELPIWL REIPNIIFRS DNQPFMYHME QFTKMIIKKM RDEKFFPRKQ IENEHTAVQQ 120 AYKEHGMRYV QWEGNMAVGL DTGVPWIMCK QVNALGPVMN TCNGRYCGDT FSGPNKNSHL 180 NIHLRHYRYR AFGDPPSERT AEDIAIAVAR FFSKKGTMAN YYMYYGGTNF GRTSSSFVTT 240 QYYDEAPIVE YGLPREPKWG HFRDLHDALK LCQKALLWGT QPVQMLGKDL EVGQKQFGSY 300 VSMLYHTPRA ILQPKNNFLV VLEEMGGKLD GIEILTVNRD TICSIAGEHY PPNVETWSRY 360 KGVIRTNVDT PKPAANLVCL DNKTITQVDF ASYGDPVGNC GHFILGKCNA PNSQKIVE* 420 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02140 | Gal_Lectin | 0.003 | 377 | 418 | 45 | + Galactose binding lectin domain. | ||
| PLN03059 | PLN03059 | 3.0e-16 | 305 | 418 | 114 | + beta-galactosidase; Provisional | ||
| pfam01301 | Glyco_hydro_35 | 1.0e-73 | 6 | 269 | 324 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 3.0e-83 | 11 | 291 | 323 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002278545.1 | 0 | 9 | 292 | 49 | 368 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002278545.1 | 1e-31 | 305 | 418 | 678 | 791 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002306183.1 | 0 | 9 | 292 | 48 | 367 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002306183.1 | 2e-29 | 305 | 418 | 675 | 788 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002312963.1 | 0 | 9 | 292 | 48 | 367 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3thd_D | 0.0000002 | 11 | 252 | 30 | 318 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 3thd_C | 0.0000002 | 11 | 252 | 30 | 318 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 3thd_B | 0.0000002 | 11 | 252 | 30 | 318 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 3thd_A | 0.0000002 | 11 | 252 | 30 | 318 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 3thc_D | 0.0000002 | 11 | 252 | 30 | 318 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| CO121155 | 276 | 32 | 292 | 0 |
| CO128575 | 296 | 21 | 280 | 0 |
| CO112063 | 264 | 32 | 280 | 0 |
| CO127398 | 262 | 34 | 280 | 0 |
| CO101350 | 236 | 66 | 292 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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