| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10036109 |
| Family | GH35 |
| Protein Properties | Length: 298 Molecular Weight: 32849.4 Isoelectric Point: 7.5658 |
| Chromosome | Chromosome/Scaffold: 76 Start: 1260433 End: 1262205 |
| Description | beta-galactosidase 8 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 41 | 216 | 0 |
| LVIDGKRRMLISGSIHYPRSTPDMWPDLIQKSKDGGVDVIETYVFWNIHEPVQNQAMAEAGLYVHLRIGPYVCAEWNYGGFPLWLHFIPGIKLRTDNEPY KTEMKRFTAKIVDMMKKEKLYASQGGPIILSQIENEYGNVDAAYGSAAKPYINWAANMAESLNTGVPWVMCQQGDA | |||
| Full Sequence |
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| Protein Sequence Length: 298 Download |
| MKRSSGGRRR EIVVAVGVLL GLALAVATAF GANVSYDHRA LVIDGKRRML ISGSIHYPRS 60 TPDMWPDLIQ KSKDGGVDVI ETYVFWNIHE PVQNQAMAEA GLYVHLRIGP YVCAEWNYGG 120 FPLWLHFIPG IKLRTDNEPY KTEMKRFTAK IVDMMKKEKL YASQGGPIIL SQIENEYGNV 180 DAAYGSAAKP YINWAANMAE SLNTGVPWVM CQQGDAPDPI SCGGAVPYRP VEDLAFSVAR 240 FFQLGGTFQN YYMYHGGTNF GRSSGGPFIA TSYDYDAPLD EYGKACGSAM AFHRQSQ* 300 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1874 | LacA | 2.0e-17 | 35 | 283 | 340 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 2.0e-123 | 40 | 283 | 305 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 6.0e-136 | 35 | 283 | 295 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF70824.1 | 0 | 1 | 283 | 1 | 330 | AF154423_1 putative beta-galactosidase [Solanum lycopersicum] |
| EMBL | CAC44501.1 | 0 | 29 | 283 | 25 | 325 | beta-galactosidase [Fragaria x ananassa] |
| EMBL | CBI16297.1 | 0 | 16 | 283 | 7 | 321 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002314274.1 | 0 | 14 | 283 | 15 | 327 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530296.1 | 0 | 9 | 283 | 3 | 320 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 2e-32 | 40 | 286 | 14 | 316 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 1e-26 | 43 | 294 | 12 | 324 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_A | 1e-26 | 43 | 294 | 12 | 324 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8c_B | 1e-26 | 43 | 294 | 12 | 324 | A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose |
| PDB | 4e8c_A | 1e-26 | 43 | 294 | 12 | 324 | A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose |
| Transmembrane Domains | |||||
|---|---|---|---|---|---|
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| Start | End | ||||
| 12 | 34 | ||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| DW076707 | 295 | 35 | 283 | 0 |
| DY971087 | 255 | 35 | 243 | 0 |
| EE182221 | 258 | 72 | 283 | 0 |
| GR166564 | 253 | 74 | 280 | 0 |
| EV257429 | 198 | 36 | 219 | 0 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Brassica rapa | Bra003128 | Bra003353 | Bra021198 | ||
| Linum usitatissimum | Lus10011237 | Lus10000271 | |||
| Malus domestica | MDP0000127542.34.225 | MDP0000127542.34.225 | |||
| Panicum virgatum | Pavirv00000761m | ||||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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