| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00000593m |
| Family | GT8 |
| Protein Properties | Length: 555 Molecular Weight: 64141.2 Isoelectric Point: 8.5772 |
| Chromosome | Chromosome/Scaffold: 040169 Start: 802 End: 4142 |
| Description | galacturonosyltransferase 7 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT8 | 226 | 527 | 0 |
| CLNMRLTLEYFKSRSISTDQLNRQKLESPAFQHYVIFSRNVLAVSTTINSTVLNCQDSGSIVFHLFTDAQNFYAMKHWFERNSYLEATVHVTNIEDHPEL PKHAEMQKLLPSEEFRVTIRNYSEPSLRQMKTDYISVFGHSHFVLPDLLPSLNRVFVLDDDLIVQKDLSSLWNLNMDGKVIGAVQFCGVKLGHLRAYISE HNFNSDACVWLSGLNVIELEKWRDLRVTSLYVQSLQKLQKESLTSKRLKALPVSLLAFQDLIYPLKDSWVQSGLGHDYGISRDHIEKAATLHYSGVMKPW LD | |||
| Full Sequence |
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| Protein Sequence Length: 555 Download |
| MQDVSKKNSG SNGIPVEKST RSKSKAKLKG AFSLVELNNN TFKSKGPHMP KRYQRKDLSW 60 RSKDTVVNGK ENHGEETVHE GNPTSCEHEY GSYCLWSTEH REIMKDAIVK RLKDQLFIAR 120 AHYPSIAKIK QHERFTRELK QSIQEHERML SDTITDADLP PIFAKKLEKM EHTIERAKSC 180 EVGCSNVERK LRQLLDMTED EAYFHTRQSA ILYHLGVQTM PKTHHCLNMR LTLEYFKSRS 240 ISTDQLNRQK LESPAFQHYV IFSRNVLAVS TTINSTVLNC QDSGSIVFHL FTDAQNFYAM 300 KHWFERNSYL EATVHVTNIE DHPELPKHAE MQKLLPSEEF RVTIRNYSEP SLRQMKTDYI 360 SVFGHSHFVL PDLLPSLNRV FVLDDDLIVQ KDLSSLWNLN MDGKVIGAVQ FCGVKLGHLR 420 AYISEHNFNS DACVWLSGLN VIELEKWRDL RVTSLYVQSL QKLQKESLTS KRLKALPVSL 480 LAFQDLIYPL KDSWVQSGLG HDYGISRDHI EKAATLHYSG VMKPWLDLGI HDYKSYWRKY 540 MTTGETFMTE CNIH* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd06429 | GT8_like_1 | 2.0e-99 | 258 | 542 | 285 | + GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. | ||
| PLN02718 | PLN02718 | 2.0e-101 | 102 | 554 | 465 | + Probable galacturonosyltransferase | ||
| PLN02910 | PLN02910 | 3.0e-102 | 91 | 553 | 479 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
| PLN02829 | PLN02829 | 1.0e-111 | 103 | 553 | 463 | + Probable galacturonosyltransferase | ||
| PLN02769 | PLN02769 | 0 | 2 | 554 | 563 | + Probable galacturonosyltransferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABA95691.2 | 0 | 3 | 554 | 35 | 596 | Glycosyl transferase family 8 protein, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | EEC67573.1 | 0 | 1 | 554 | 78 | 642 | hypothetical protein OsI_34919 [Oryza sativa Indica Group] |
| GenBank | EEC68769.1 | 0 | 3 | 554 | 98 | 659 | hypothetical protein OsI_37298 [Oryza sativa Indica Group] |
| RefSeq | NP_001065619.1 | 0 | 1 | 554 | 78 | 642 | Os11g0124900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002441763.1 | 0 | 1 | 554 | 90 | 654 | hypothetical protein SORBIDRAFT_08g002010 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ga8_A | 0.009 | 359 | 525 | 78 | 252 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 1g9r_A | 0.009 | 359 | 525 | 78 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| JG911389 | 273 | 188 | 460 | 0 |
| JG962441 | 273 | 63 | 335 | 0 |
| FL766101 | 256 | 25 | 280 | 0 |
| FL772161 | 266 | 247 | 512 | 0 |
| GO854789 | 310 | 1 | 302 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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