| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00002017m |
| Family | GT48 |
| Protein Properties | Length: 432 Molecular Weight: 49788 Isoelectric Point: 10.0462 |
| Chromosome | Chromosome/Scaffold: 0106109 Start: 101 End: 2156 |
| Description | glucan synthase-like 4 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT48 | 5 | 288 | 0 |
| VYFNSLISVVGVYVFLYGQLYLVLSGLQRALLHDAQTQNIKSLETALASQSFLQLGLLTGLPMVMELGLEKGFRASLSDFILMQLQLASVFFTFSLGTKA HYYGRTILHGGAKYRPTGRKFVVFHASFTENYQLYSRSHFVKGFELVFLLIVYHIFRRSYVSSVLHVMITYSTWFMAVTWLFTPFLFNPAGFAWQKIVED WADWNRWMRNQGGIGVQPEKSWESWWNAENAHLRHSVLSSRILEVLLSLRFFIYQYGLVYHLNISQDNKNFLVYLLSWVVIIAI | |||
| Full Sequence |
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| Protein Sequence Length: 432 Download |
| LILNVYFNSL ISVVGVYVFL YGQLYLVLSG LQRALLHDAQ TQNIKSLETA LASQSFLQLG 60 LLTGLPMVME LGLEKGFRAS LSDFILMQLQ LASVFFTFSL GTKAHYYGRT ILHGGAKYRP 120 TGRKFVVFHA SFTENYQLYS RSHFVKGFEL VFLLIVYHIF RRSYVSSVLH VMITYSTWFM 180 AVTWLFTPFL FNPAGFAWQK IVEDWADWNR WMRNQGGIGV QPEKSWESWW NAENAHLRHS 240 VLSSRILEVL LSLRFFIYQY GLVYHLNISQ DNKNFLVYLL SWVVIIAIIG LVKLVNCASR 300 RLSTKHQLIF RVIKLLIFLM VVTSLILLYC LCQLSIMDLI ICCLAFIPTG WGLLLIVQVL 360 RPKIEYYAIW EPIQVIAHAY DYGMGSLLFS PIAVLAWMPV ISAIQTRVLF NRAFSRQLQI 420 QPFIVGKTKR R* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02364 | Glucan_synthase | 9.0e-48 | 6 | 298 | 331 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000148 | 1,3-beta-D-glucan synthase complex |
| GO:0003843 | 1,3-beta-D-glucan synthase activity |
| GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB02389.1 | 0 | 6 | 431 | 1547 | 1972 | glucan synthase-like protein [Arabidopsis thaliana] |
| EMBL | CBI17681.1 | 0 | 6 | 430 | 1627 | 2051 | unnamed protein product [Vitis vinifera] |
| Swiss-Prot | Q9LUD7 | 0 | 6 | 431 | 1551 | 1976 | CALS8_ARATH RecName: Full=Putative callose synthase 8; AltName: Full=1,3-beta-glucan synthase; AltName: Full=Protein GLUCAN SYNTHASE-LIKE 4 |
| RefSeq | XP_002267956.1 | 0 | 6 | 430 | 1501 | 1925 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002451859.1 | 0 | 6 | 431 | 118 | 544 | hypothetical protein SORBIDRAFT_04g008830 [Sorghum bicolor] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| callose biosynthesis | 13-BETA-GLUCAN-SYNTHASE-RXN | EC-2.4.1.34 | 1,3-β-glucan synthase |
| Transmembrane Domains | ||||
|---|---|---|---|---|
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| Start | End | |||
| 5 | 27 | |||
| 84 | 101 | |||
| 164 | 186 | |||
| 246 | 268 | |||
| 275 | 294 | |||
| 309 | 331 | |||
| 338 | 360 | |||
| 382 | 404 | |||
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GO876767 | 333 | 31 | 363 | 0 |
| CN127234 | 268 | 144 | 411 | 0 |
| JG902317 | 245 | 6 | 250 | 0 |
| JG937221 | 240 | 173 | 412 | 0 |
| DT651965 | 220 | 213 | 432 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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