| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00005035m |
| Family | GT48 |
| Protein Properties | Length: 421 Molecular Weight: 47550 Isoelectric Point: 10.0911 |
| Chromosome | Chromosome/Scaffold: 017801 Start: 3531 End: 9348 |
| Description | glucan synthase-like 8 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT48 | 1 | 277 | 0 |
| MTVLTVYIFLYGRVYLALSGLDYSISRQARFLGNTALDAALNAQFLVQIGVFTAVPMIMGFILELGLMKAVFSFITMQLQFCSVFFTFSLGTRTHYFGRT ILHGGAKYRATGRGFVVRHIKFAENYRLYSRSHFVKALEVALLLIIYIAYGYTKGGSSSFILITISSWILVFSWLFAPYIFNPSGFEWQKTVEDFDDWTN WLLYKGGVGVKGDNSWESWWDEEQSHIRTFRGRILETILSLRFLIFQYGIVYKLKITSHNTSLAVYGFSWIVLLVTV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 421 Download |
| MTVLTVYIFL YGRVYLALSG LDYSISRQAR FLGNTALDAA LNAQFLVQIG VFTAVPMIMG 60 FILELGLMKA VFSFITMQLQ FCSVFFTFSL GTRTHYFGRT ILHGGAKYRA TGRGFVVRHI 120 KFAENYRLYS RSHFVKALEV ALLLIIYIAY GYTKGGSSSF ILITISSWIL VFSWLFAPYI 180 FNPSGFEWQK TVEDFDDWTN WLLYKGGVGV KGDNSWESWW DEEQSHIRTF RGRILETILS 240 LRFLIFQYGI VYKLKITSHN TSLAVYGFSW IVLLVTVLLF KLFTATPKKS TALPTFVRFL 300 QGLLALGIIA GIALLIVFTR FTIADLFASA LAFIATGWCV LCLAITWKGL VKTLGLWDSV 360 REIARMYDAG MGAVIFVPIV FFSWFPFVST FQSRTLFNQA FSRGLEISLI LAGNKANQQT 420 * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02364 | Glucan_synthase | 4.0e-55 | 1 | 271 | 311 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000148 | 1,3-beta-D-glucan synthase complex |
| GO:0003843 | 1,3-beta-D-glucan synthase activity |
| GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD67750.1 | 0 | 1 | 419 | 1352 | 1770 | putative beta 1,3 glucan synthase [Oryza sativa Japonica Group] |
| GenBank | EEC79862.1 | 0 | 1 | 419 | 1528 | 1946 | hypothetical protein OsI_21355 [Oryza sativa Indica Group] |
| GenBank | EEE64970.1 | 0 | 1 | 419 | 1401 | 1819 | hypothetical protein OsJ_19875 [Oryza sativa Japonica Group] |
| RefSeq | NP_001056596.1 | 0 | 33 | 419 | 1 | 387 | Os06g0112800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002468699.1 | 0 | 1 | 420 | 2 | 421 | hypothetical protein SORBIDRAFT_01g050470 [Sorghum bicolor] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| callose biosynthesis | 13-BETA-GLUCAN-SYNTHASE-RXN | EC-2.4.1.34 | 1,3-β-glucan synthase |
| Transmembrane Domains | ||||
|---|---|---|---|---|
 | ||||
| Start | End | |||
| 3 | 25 | |||
| 45 | 67 | |||
| 128 | 150 | |||
| 160 | 182 | |||
| 262 | 284 | |||
| 299 | 318 | |||
| 325 | 347 | |||
| 369 | 391 | |||
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| GT036680 | 345 | 75 | 419 | 0 |
| HO796781 | 409 | 9 | 417 | 0 |
| DY895770 | 313 | 64 | 376 | 0 |
| CT842215 | 270 | 32 | 301 | 0 |
| FL955738 | 236 | 1 | 236 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |