Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00015447m |
Family | GT31 |
Protein Properties | Length: 585 Molecular Weight: 65221.3 Isoelectric Point: 6.0469 |
Chromosome | Chromosome/Scaffold: 060261 Start: 62 End: 3889 |
Description | Galactosyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT31 | 353 | 533 | 0 |
ERMGVRKTWMSSVRKSPNMVARFFVALHGRKEVNVELKKEAEYFGDIVFVPFLDNYDLVVMKTLAICEYGVNVVSAKYVMKCDDDTFVRLDSVVAEIKKV PSGRSLYIGSMNIQHKPLRHGKWAVTYEEWPEEVYPAYANGPGYVLSSDIAHFIMSEFMKQGLTLFKMEDVSMGLWVQQFN |
Full Sequence |
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Protein Sequence Length: 585 Download |
PRPAAADVAG PSARGRDRLS RFATGLDLRL LDTARSGALR GQIADAVAAG ARVFTELETL 60 DADAAALAAP SGEGDAAPAR CPQSIALSAE QLRARGRVVE LPCGLALGSH VTVAATPRAP 120 HEERDPAIAV VRDGEVPAMV SQFMVELQGL RAVDGEDPPR VLHFNPRLRG DWSGRPVIEQ 180 NTCYRMNWGA AQRCEGWRSR PDEETVDGLV KCEKWIRDDD QRSEESKTAW WLNRLIGQKK 240 EVNFDWPYPF VEGRLFVLTL SAGLEGYHVS VDGRHVTSFP YRTGFVLEDA TGLFLNGDLD 300 VHSVFAGSLP TTHPSFAPQN YLDFSTVWQA PPLPDEPAEI FIGIMSSANH FAERMGVRKT 360 WMSSVRKSPN MVARFFVALH GRKEVNVELK KEAEYFGDIV FVPFLDNYDL VVMKTLAICE 420 YGVNVVSAKY VMKCDDDTFV RLDSVVAEIK KVPSGRSLYI GSMNIQHKPL RHGKWAVTYE 480 EWPEEVYPAY ANGPGYVLSS DIAHFIMSEF MKQGLTLFKM EDVSMGLWVQ QFNRTIPVEY 540 IHSAKFCPYG CIDDYYTAHY QSPRLMLCMW EKLLEGRPGC CNVR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
smart00908 | Gal-bind_lectin | 3.0e-16 | 102 | 304 | 203 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
cd00070 | GLECT | 1.0e-19 | 98 | 305 | 208 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
pfam00337 | Gal-bind_lectin | 4.0e-24 | 97 | 304 | 208 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
pfam01762 | Galactosyl_T | 3.0e-27 | 352 | 530 | 189 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
PLN03133 | PLN03133 | 4.0e-130 | 80 | 584 | 524 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY92235.1 | 0 | 1 | 584 | 78 | 655 | hypothetical protein OsI_13955 [Oryza sativa Indica Group] |
GenBank | EAZ03101.1 | 0 | 4 | 584 | 85 | 675 | hypothetical protein OsI_25245 [Oryza sativa Indica Group] |
GenBank | EEE66740.1 | 0 | 4 | 584 | 87 | 633 | hypothetical protein OsJ_23432 [Oryza sativa Japonica Group] |
RefSeq | NP_001059116.1 | 0 | 4 | 584 | 87 | 663 | Os07g0195200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002463707.1 | 0 | 18 | 584 | 92 | 656 | hypothetical protein SORBIDRAFT_01g004630 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL963616 | 256 | 196 | 451 | 0 |
DY268182 | 357 | 117 | 469 | 0 |
HO799491 | 317 | 164 | 479 | 0 |
EX131848 | 317 | 112 | 424 | 0 |
HO799491 | 92 | 79 | 170 | 0.000000000000002 |
Sequence Alignments (This image is cropped. Click for full image.) |
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