Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00069573m |
Family | GT31 |
Protein Properties | Length: 651 Molecular Weight: 72235.8 Isoelectric Point: 8.7612 |
Chromosome | Chromosome/Scaffold: 008961 Start: 66 End: 4153 |
Description | Galactosyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT31 | 418 | 598 | 0 |
ERMAVRKSWMMYTRKSSNIVARFFVALNGKKEVNAELKKEAEFFCDIVIVPFIDSYDLVVLKTVAIAEYGVRVVPAKYVMKCDDDTFVRIDSVLDQVKKV QKDKSVYVGSINYFHRPLRSGKWAVTYEEWPEEVYPNYANGPGYVISSDIARYIVSEFDNQTLRLFKMEDVSMGMWVEKFN |
Full Sequence |
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Protein Sequence Length: 651 Download |
MPAPAPRKKR LVRAGLLAAA AGYLAFVLLF ELPLLPFSGS SALPIPHPRR RELEAAAAAA 60 FASPSSPARP AKPAFPAGAP APAAGGARPL PVFSSLLLLP RPNATATPFD AAAADAFAAA 120 RPHLAHLRAA PAPTSSASTA PPPACPASVA VQREQLPYDG VRVVELPCGL AVGSHVTAVA 180 RPRPARPESD PKIAQRKDGE AAVMVSQFMV ELVGAKAVDG EAPPRILHFN PRIRGDYSRR 240 PVIEMNSCYR MQWGHSQRCE GFASRPAEDT VDGQLKCEKW IRDDDNKTEE SKMKWWVKRL 300 IGRPKDVHIS WPYPFTEGKL FVMTLTAGLE GYHVNVDGRH VASFPYRTGY SLEDATALSL 360 NGDIDIESVY ASSLPNSHPS FAPERYLEMS EQWRAPPLPT EPVELFIGIL SAASHFAERM 420 AVRKSWMMYT RKSSNIVARF FVALNGKKEV NAELKKEAEF FCDIVIVPFI DSYDLVVLKT 480 VAIAEYGVRV VPAKYVMKCD DDTFVRIDSV LDQVKKVQKD KSVYVGSINY FHRPLRSGKW 540 AVTYEEWPEE VYPNYANGPG YVISSDIARY IVSEFDNQTL RLFKMEDVSM GMWVEKFNNT 600 WRPVEIRHDV RFYQSGCYDG YFTAHYQSPQ HMICLWRKLQ SGSAQCCNVR * 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
smart00908 | Gal-bind_lectin | 3.0e-16 | 167 | 369 | 203 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
pfam01762 | Galactosyl_T | 5.0e-20 | 417 | 596 | 195 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
cd00070 | GLECT | 2.0e-20 | 163 | 369 | 207 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
pfam00337 | Gal-bind_lectin | 4.0e-24 | 162 | 369 | 208 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
PLN03133 | PLN03133 | 5.0e-116 | 166 | 650 | 496 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN34354.1 | 0 | 1 | 650 | 1 | 661 | unknown [Zea mays] |
DDBJ | BAC83183.1 | 0 | 32 | 650 | 33 | 655 | galactosyltransferase family-like protein [Oryza sativa Japonica Group] |
GenBank | EEE66738.1 | 0 | 43 | 650 | 1 | 579 | hypothetical protein OsJ_23430 [Oryza sativa Japonica Group] |
RefSeq | NP_001146977.1 | 0 | 1 | 650 | 1 | 663 | LOC100280586 [Zea mays] |
RefSeq | XP_002461635.1 | 0 | 2 | 650 | 3 | 665 | hypothetical protein SORBIDRAFT_02g005780 [Sorghum bicolor] |