| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00031557m |
| Family | AA2 |
| Protein Properties | Length: 328 Molecular Weight: 34830.8 Isoelectric Point: 9.0821 |
| Chromosome | Chromosome/Scaffold: 012469 Start: 5695 End: 8945 |
| Description | Peroxidase superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| AA2 | 47 | 311 | 0 |
| VTQKLQETFNAAPGTLRLFFHDCFVRGCDASVLLSGPGDEHSAGADTTLSPDALDLVTRAKAAVDGDPRCANKVSCADILALAARDVVSQTGGPYYPVEL GRLDGKVGTRAVVKHSLPGAGFDLDQLNKLFAANGLTQTDMIALSGGHTIGVTHCDKFVRRLYPFKGGAGAAGPPMNLYFLRQMRQTCPLNYSPSAFAML DAVSPRKFDNGYYQTLQQMKGLLASDQVLFADRRSRATVNYFAANQTAFFDAFAAAMAKLGRVGV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 328 Download |
| MRSSLRRSVV AAAVVALAAA WCAAAQLNQS YYASTCPNVE TLVRGAVTQK LQETFNAAPG 60 TLRLFFHDCF VRGCDASVLL SGPGDEHSAG ADTTLSPDAL DLVTRAKAAV DGDPRCANKV 120 SCADILALAA RDVVSQTGGP YYPVELGRLD GKVGTRAVVK HSLPGAGFDL DQLNKLFAAN 180 GLTQTDMIAL SGGHTIGVTH CDKFVRRLYP FKGGAGAAGP PMNLYFLRQM RQTCPLNYSP 240 SAFAMLDAVS PRKFDNGYYQ TLQQMKGLLA SDQVLFADRR SRATVNYFAA NQTAFFDAFA 300 AAMAKLGRVG VKTGADGEIR RVCTKVN* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00691 | ascorbate_peroxidase | 2.0e-13 | 43 | 200 | 165 | + Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water. | ||
| pfam00141 | peroxidase | 1.0e-54 | 43 | 202 | 166 | + Peroxidase. | ||
| PLN03030 | PLN03030 | 4.0e-66 | 31 | 327 | 301 | + cationic peroxidase; Provisional | ||
| cd00693 | secretory_peroxidase | 7.0e-131 | 26 | 326 | 302 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004601 | peroxidase activity |
| GO:0006979 | response to oxidative stress |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABS86778.1 | 0 | 20 | 327 | 28 | 337 | peroxidase 16 precursor protein [Oryza sativa Indica Group] |
| GenBank | ACF86227.1 | 0 | 31 | 327 | 37 | 331 | unknown [Zea mays] |
| RefSeq | NP_001058450.1 | 0 | 20 | 327 | 28 | 337 | Os06g0695500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001152697.1 | 0 | 31 | 327 | 37 | 331 | LOC100286338 [Zea mays] |
| RefSeq | XP_002437516.1 | 0 | 26 | 327 | 35 | 336 | hypothetical protein SORBIDRAFT_10g028500 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1qo4_A | 0 | 26 | 327 | 2 | 304 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
| PDB | 1pa2_A | 0 | 26 | 327 | 2 | 304 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 3hdl_A | 0 | 31 | 327 | 6 | 303 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
| PDB | 4a5g_B | 0 | 27 | 327 | 4 | 305 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 4a5g_A | 0 | 27 | 327 | 4 | 305 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |
