| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00034981m |
| Family | GH17 |
| Protein Properties | Length: 361 Molecular Weight: 37961.4 Isoelectric Point: 12.2173 |
| Chromosome | Chromosome/Scaffold: 032615 Start: 1895 End: 3367 |
| Description | beta-1,3-glucanase 3 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH17 | 31 | 171 | 2.10195e-44 |
| IGVCYGVNGGGLPSAGDVVRLYQSNGINLMRIYFPDADALRALSGSNIGLIMDVPNENLGSIASDPNAAAAWVRDNVQAFPAVSFRYIAVGNEVAGGDTA SILPAMRNIDAALADAGLGAVKVSTAVQSGSRRGSRRRPAA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 361 Download |
| MAKQQGVVAS MVALALLLGT FAAIPTGVQS IGVCYGVNGG GLPSAGDVVR LYQSNGINLM 60 RIYFPDADAL RALSGSNIGL IMDVPNENLG SIASDPNAAA AWVRDNVQAF PAVSFRYIAV 120 GNEVAGGDTA SILPAMRNID AALADAGLGA VKVSTAVQSG SRRGSRRRPA ASRRATWAPS 180 RSTCRAPARR SSQTSTPTSP TSATRPRSTS TTRSSPPPAP SCRTAATPTR TSSTRSSTPS 240 TPRSRTPARG TSASSCRRAA GRRRGATRPP RPTRRPTTRT SSTMSGRARP SAPGPSRPTY 300 SPCSTRTGSP EQRRRSTSDC STRTNRRHTP SVSEPTDFIQ EQDIHTDIHT HRNNEIVLQI 360 * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00332 | Glyco_hydro_17 | 8.0e-43 | 31 | 157 | 130 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABB04443.1 | 0 | 5 | 164 | 4 | 164 | pathogenesis-related protein 6 [Zea mays subsp. parviglumis] |
| GenBank | ABB04449.1 | 0 | 5 | 164 | 4 | 164 | truncated pathogenesis-related protein 6 [Zea mays subsp. parviglumis] |
| GenBank | ABB04452.1 | 0 | 5 | 164 | 4 | 164 | pathogenesis-related protein 6 [Zea mays subsp. parviglumis] |
| GenBank | ACJ62646.1 | 0 | 5 | 164 | 4 | 164 | beta 1,3 glucanase [Zea mays subsp. parviglumis] |
| GenBank | ACJ62691.1 | 0 | 5 | 164 | 4 | 164 | beta 1,3 glucanase [Zea mays subsp. parviglumis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghs_B | 3e-37 | 31 | 157 | 1 | 128 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 3e-37 | 31 | 157 | 1 | 128 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghr_A | 5e-35 | 31 | 157 | 1 | 127 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1aq0_B | 5e-35 | 31 | 157 | 1 | 127 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 5e-35 | 31 | 157 | 1 | 127 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
