| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00069450m |
| Family | GT92 |
| Protein Properties | Length: 500 Molecular Weight: 55686.8 Isoelectric Point: 8.5553 |
| Chromosome | Chromosome/Scaffold: 009669 Start: 8022 End: 10550 |
| Description | Domain of unknown function (DUF23) |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT92 | 238 | 445 | 0 |
| DYLYCGSSLYGDLSAARVREWMAYHARFFGDRSHFVFHDAGGAGPAVRVALEPWVRAGRATLQDVRAQAEYDGWYYNQFLVVNDCLHRYRHAAKWTFFFD VDEYIFLPDGRKLEDVLAELEPYTQFTIEQNPMSSRLCVDNPDADYSNQWGFEKLVFRNSITGVRRDRKYAIQAKNAYATGVHMSENVIGNTTHKTEHLI RYYHYHNS | |||
| Full Sequence |
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| Protein Sequence Length: 500 Download |
| MRKDAAGGGA GGIAPGALLC FDIKPFLAAL TALTLLAAAW QLRPYRSPFP ADLCAQAAAG 60 APPRALAVHA KKSESSSSAN STASSSPPPG PEVREFRAVG SAAALFVQMG AYRGGPYTFA 120 VVGLASKPAH VYGKPWFRCE WEPNNPRPNA SSSPPESMRA ARAYHMLPDW GYGRVYTVVV 180 VNCTFPREPN ADNAGGRLVL YAHHGPSRSR DSPRERIVAL EEAPGAYDAA AAFRPRYDYL 240 YCGSSLYGDL SAARVREWMA YHARFFGDRS HFVFHDAGGA GPAVRVALEP WVRAGRATLQ 300 DVRAQAEYDG WYYNQFLVVN DCLHRYRHAA KWTFFFDVDE YIFLPDGRKL EDVLAELEPY 360 TQFTIEQNPM SSRLCVDNPD ADYSNQWGFE KLVFRNSITG VRRDRKYAIQ AKNAYATGVH 420 MSENVIGNTT HKTEHLIRYY HYHNSINVLG EVCREFVPIP PKGCLTWSEK TPWYYDDSMK 480 RIADAVREFE RKTIGDVRL* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13704 | Glyco_tranf_2_4 | 0.002 | 252 | 354 | 104 | + Glycosyl transferase family 2. Members of this family of prokaryotic proteins include putative glucosyltransferases, | ||
| pfam01697 | Glyco_transf_92 | 4.0e-22 | 239 | 452 | 234 | + Glycosyltransferase family 92. Members of this family act as galactosyltransferases, belonging to glycosyltransferase family 92. The aligned region contains several conserved cysteine residues and several charged residues that may be catalytic residues. This is supported by the inclusion of this family in the GT-A glycosyl transferase superfamily. | ||
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ01730.1 | 0 | 17 | 499 | 22 | 522 | hypothetical protein OsI_23756 [Oryza sativa Indica Group] |
| GenBank | EAZ37686.1 | 0 | 17 | 499 | 22 | 522 | hypothetical protein OsJ_22025 [Oryza sativa Japonica Group] |
| RefSeq | NP_001058107.1 | 0 | 17 | 499 | 22 | 489 | Os06g0624700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001130404.1 | 0 | 1 | 499 | 1 | 501 | hypothetical protein LOC100191500 [Zea mays] |
| RefSeq | XP_002437304.1 | 0 | 1 | 499 | 1 | 509 | hypothetical protein SORBIDRAFT_10g024570 [Sorghum bicolor] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| FL853471 | 225 | 239 | 463 | 0 |
| DT644771 | 273 | 105 | 374 | 0 |
| EL681770 | 281 | 161 | 440 | 0 |
| FL853471 | 35 | 444 | 478 | 0.02 |
| FL853471 | 9 | 483 | 491 | 0.02 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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