CAZyme Information

Basic Information
SpeciesPhyscomitrella patens
Cazyme IDPp1s112_159V6.1
FamilyGT92
Protein PropertiesLength: 527 Molecular Weight: 60255 Isoelectric Point: 6.2414
ChromosomeChromosome/Scaffold: 112 Start: 763588 End: 765364
DescriptionDomain of unknown function (DUF23)
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT922574890
  DYVYCGSPLFGNLSPQKIREWIAYHAHFFGPRSHFFLYDAGGIHEEVRRVIEPWIKAGRVTLDNIREQEKFDGYYHNQFLVVNDCFHRARRLAHWLFFFD
  VDEYIWAPPNDNSLASILARFEDQSQIIIWQKPMSKSLCAQDQGAASNDSSFASKWTFEKLVFKSIKWRESHDCKYAIRGLKAMATGIHRSGYLIGSNAT
  TYADPLNYYHYHNTINKREEVCEQFIDSNSVYV
Full Sequence
Protein Sequence     Length: 527     Download
MARQWLRKSE LNDKLWKGDK GDTVLDTSMA GVRTALSAES LAKFILLVGI NSVFLLAALH    60
VLHSNREFEN PGDRSNCITS DRLNNVHPIS LSQDQNRLIK TSESTTNNEL QENVRQFDTF    120
GVAVYLFIKM SAYRDGPRSF TIVGLEAKNP AELYNDPPYE CVWIPGPDSV VWAPSKGSTF    180
KMLPDTGNVY SRLYSAVIIN CTFSQDVGVD RKGGQLVLYA SYGDQFPRNP ERIVALTEAP    240
DEFLGMEYYE SPEMKYDYVY CGSPLFGNLS PQKIREWIAY HAHFFGPRSH FFLYDAGGIH    300
EEVRRVIEPW IKAGRVTLDN IREQEKFDGY YHNQFLVVND CFHRARRLAH WLFFFDVDEY    360
IWAPPNDNSL ASILARFEDQ SQIIIWQKPM SKSLCAQDQG AASNDSSFAS KWTFEKLVFK    420
SIKWRESHDC KYAIRGLKAM ATGIHRSGYL IGSNATTYAD PLNYYHYHNT INKREEVCEQ    480
FIDSNSVYVN PRNRTDKFAY DDGLAVLADH IKEFELDVIG PQPFIL* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam13704Glyco_tranf_2_41.0e-6274374104+
pfam01697Glyco_transf_924.0e-24256447201+
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqXP_001758423.107052628472predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001759086.101135261414predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001769268.101135261414predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001775945.101155201396predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001777796.101305261382predicted protein [Physcomitrella patens subsp. patens]
Transmembrane Domains
StartEnd
4062
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
DC9564172992295270
DC9508552802485270
DC931099250242730
DC9369332652254890
DC93337223312330
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_030_00278.2Aquca_030_00278.1Aquca_007_00975.1
Arabidopsis lyrata492851494517902431
Arabidopsis thalianaAT5G44670.1AT4G20170.1AT2G33570.1AT5G48190.1AT3G60990.1
AT3G07380.1
Brachypodium distachyonBradi1g42556.1Bradi1g35710.2Bradi1g35710.1Bradi3g53170.1
Brassica rapaBra020933Bra033759Bra022944Bra005484
Carica papayaevm.model.supercontig_1291.2evm.model.supercontig_36.102
Capsella rubellaCarubv10004512mCarubv10026267mCarubv10023079m
Citrus clementinaCiclev10014882m
Citrus sinensisorange1.1g009350m
Cucumis sativusCucsa.049020.1
Eucalyptus grandisEucgr.E04328.1Eucgr.F03619.1
Fragaria vescamrna19924.1-v1.0-hybridmrna29146.1-v1.0-hybrid
Glycine maxGlyma09g05300.2Glyma15g16630.1Glyma16g14690.1Glyma08g36030.2
Gossypium raimondiiGorai.008G052100.1Gorai.007G359700.1Gorai.006G138000.1
Linum usitatissimumLus10008076Lus10038387Lus10024731Lus10036247
Malus domesticaMDP0000126481MDP0000126479MDP0000661922MDP0000203716
Manihot esculentacassava4.1_005572mcassava4.1_005594mcassava4.1_006235m
Medicago truncatulaMedtr8g070700.1
Mimulus guttatusmgv1a004537mmgv1a005071m
Oryza sativaLOC_Os06g22330.1LOC_Os02g48190.1LOC_Os06g41910.1
Panicum virgatumPavirv00018157mPavirv00039959mPavirv00055571mPavirv00069450mPavirv00047984m
Pavirv00032304m
Physcomitrella patensPp1s35_57V6.1Pp1s98_254V6.1Pp1s198_141V6.1Pp1s227_17V6.1Pp1s35_63V6.1
Pp1s32_144V6.1Pp1s237_6V6.1Pp1s225_53V6.1Pp1s556_1V6.1Pp1s25_268V6.1
Pp1s401_34V6.1Pp1s88_162V6.1
Phaseolus vulgarisPhvul.009G244900.1Phvul.003G275200.1
Picea abiesMA_2788g0010MA_102296g0010MA_630451g0010MA_127644g0010MA_169299g0010
MA_43513g0010MA_401686g0010MA_10433350g0010MA_99230g0010MA_960165g0010.252.357
MA_960165g0010.252.357MA_960165g0010.360.466MA_960165g0010.360.466MA_898638g0010
Populus trichocarpaPotri.001G074600.1Potri.003G156600.1Potri.005G258900.1
Prunus persicappa004238mppa025548m
Ricinus communis28563.m00009330170.m014246
Setaria italicaSi017001mSi006264m
Selaginella moellendorffii77156406883
Sorghum bicolorSb10g013010.1Sb10g024570.1Sb04g030080.1
Thellungiella halophilaThhalv10024965mThhalv10000855mThhalv10016550m
Vitis viniferaGSVIVT01010061001GSVIVT01013454001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)