| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.018G068600.2 |
| Family | GH17 |
| Protein Properties | Length: 368 Molecular Weight: 40901.1 Isoelectric Point: 7.0828 |
| Chromosome | Chromosome/Scaffold: 18 Start: 8742635 End: 8747047 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH17 | 27 | 345 | 0 |
| IGVCYGRNADDLPTPDKVAQLVQQHKIKYLRIYDSSIQVLKAFANTGVELMIGITNSDLLPFSQFQSNVDTWLKNSVLPYYPAARITCITVGAEVTESPG NASALVVPAMHNVLMALKKVGLHKKIKVSSTHSLGVLSRSFPPSAGAFNSSHAFFLKPMLEFLAENQSPFMIDIYPYYAYRDSPNNVSLDYALFETSSEV IDPNTGLLYTNMFDAQIDAIYFALMALNFRTIKVMVTETGWPSKGSSKEKAATPDNAQIYNTNLIRHVINNSGTPAKLGEELDVYIFSLFNENRKPGMES ERNWGLFYPDQTSVYSLDF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 368 Download |
| MARGVEQLIF LISLLLTLLV LCRGSTIGVC YGRNADDLPT PDKVAQLVQQ HKIKYLRIYD 60 SSIQVLKAFA NTGVELMIGI TNSDLLPFSQ FQSNVDTWLK NSVLPYYPAA RITCITVGAE 120 VTESPGNASA LVVPAMHNVL MALKKVGLHK KIKVSSTHSL GVLSRSFPPS AGAFNSSHAF 180 FLKPMLEFLA ENQSPFMIDI YPYYAYRDSP NNVSLDYALF ETSSEVIDPN TGLLYTNMFD 240 AQIDAIYFAL MALNFRTIKV MVTETGWPSK GSSKEKAATP DNAQIYNTNL IRHVINNSGT 300 PAKLGEELDV YIFSLFNENR KPGMESERNW GLFYPDQTSV YSLDFSGKEC LRLGMWLWRC 360 GLLCYSA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 2.0e-10 | 25 | 336 | 324 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-110 | 27 | 345 | 319 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABD91576.1 | 0 | 1 | 348 | 1 | 348 | beta-1,3-glucanase [Medicago sativa] |
| GenBank | ABD91577.1 | 0 | 1 | 348 | 1 | 348 | beta-1,3-glucanase [Medicago sativa] |
| RefSeq | XP_002283473.1 | 0 | 1 | 353 | 1 | 352 | PREDICTED: similar to beta-1,3-glucanase [Vitis vinifera] |
| RefSeq | XP_002330523.1 | 0 | 1 | 353 | 1 | 353 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002514201.1 | 0 | 1 | 348 | 1 | 347 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 27 | 345 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 27 | 345 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 27 | 345 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3ur8_B | 0 | 27 | 346 | 3 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3ur8_A | 0 | 27 | 346 | 3 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
