| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb03g001560.1 |
| Family | CBM49 |
| Protein Properties | Length: 655 Molecular Weight: 69784.9 Isoelectric Point: 7.9711 |
| Chromosome | Chromosome/Scaffold: 3 Start: 1421571 End: 1424750 |
| Description | glycosyl hydrolase 9C3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM49 | 561 | 639 | 1.1e-33 |
| IEIEQNATASWTERGKTYHRYAVTVTNRSLIKTVHELHIGISKLYGQVWGVDKARYGYVLPSGLPSLPAGKSASFVYVQ | |||
| GH9 | 45 | 512 | 0 |
| DYRQALSKSILYFEAQRSGRLPGSQRVSWRADSGLRDGKANGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSVLEYGKQMAAAGELGHAVEAIKWGTDYL VKAHPEPNVLYGEVGDGDSDHDCWMRPEDMTTSRQAYRLDPQNPGSELAGETAAAMAAASLVFRSSNPGYGNTLLQHSKQLFDFADKYRGRYDSSITVAR KYYASSSGYGDELLWAAAWLHEATGESRYLDYLATNADALGGTGWSINQFGWDVKYPGVQVLAAMFLLRRGGNAGAHADVLRRYKQKADLFACSCLGRGG ANSVRRTPGGMVYHQSWNNVQFVTSAAFLLAAYADHLAAAGQAAQCPSAGGSSAQPSELLAFARSQVDYILGSNPRATSYMVGYGATYPRQAHHRGASIV SVKANPSFVSCQAGYSSWYHRRSANPNLLDGATVGGPDEYDNFADERDNYEQTEATTYNNAPLMGVLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 655 Download |
| MARGGGRGGG GSRGAVVDSM AVVLIGLAMA LAAATTQVAS AAGHDYRQAL SKSILYFEAQ 60 RSGRLPGSQR VSWRADSGLR DGKANGVDLV GGYYDAGDNV KFGLPMAFTV TMMSWSVLEY 120 GKQMAAAGEL GHAVEAIKWG TDYLVKAHPE PNVLYGEVGD GDSDHDCWMR PEDMTTSRQA 180 YRLDPQNPGS ELAGETAAAM AAASLVFRSS NPGYGNTLLQ HSKQLFDFAD KYRGRYDSSI 240 TVARKYYASS SGYGDELLWA AAWLHEATGE SRYLDYLATN ADALGGTGWS INQFGWDVKY 300 PGVQVLAAMF LLRRGGNAGA HADVLRRYKQ KADLFACSCL GRGGANSVRR TPGGMVYHQS 360 WNNVQFVTSA AFLLAAYADH LAAAGQAAQC PSAGGSSAQP SELLAFARSQ VDYILGSNPR 420 ATSYMVGYGA TYPRQAHHRG ASIVSVKANP SFVSCQAGYS SWYHRRSANP NLLDGATVGG 480 PDEYDNFADE RDNYEQTEAT TYNNAPLMGV LARLAAGHGG GRFGHHSVAA DLPAEASSST 540 AINRTSLPSP TPAAPEHASP IEIEQNATAS WTERGKTYHR YAVTVTNRSL IKTVHELHIG 600 ISKLYGQVWG VDKARYGYVL PSGLPSLPAG KSASFVYVQA APPADVWVTG YKLL* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00759 | Glyco_hydro_9 | 9.0e-175 | 45 | 507 | 466 | + Glycosyl hydrolase family 9. | ||
| PLN02171 | PLN02171 | 0 | 43 | 654 | 615 | + endoglucanase | ||
| PLN02340 | PLN02340 | 0 | 43 | 652 | 612 | + endoglucanase | ||
| PLN02420 | PLN02420 | 0 | 43 | 508 | 467 | + endoglucanase | ||
| PLN00119 | PLN00119 | 0 | 45 | 508 | 465 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030246 | carbohydrate binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN25631.1 | 0 | 19 | 654 | 2 | 623 | unknown [Zea mays] |
| GenBank | EAY73052.1 | 0 | 1 | 654 | 1 | 640 | hypothetical protein OsI_00928 [Oryza sativa Indica Group] |
| RefSeq | NP_001042423.1 | 0 | 1 | 654 | 1 | 640 | Os01g0220100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002440792.1 | 0 | 22 | 654 | 6 | 627 | hypothetical protein SORBIDRAFT_09g006670 [Sorghum bicolor] |
| RefSeq | XP_002454930.1 | 0 | 15 | 654 | 15 | 654 | hypothetical protein SORBIDRAFT_03g001560 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 44 | 516 | 3 | 430 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1ksc_A | 0 | 44 | 516 | 3 | 430 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1ks8_A | 0 | 44 | 516 | 3 | 430 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 2xfg_A | 0 | 37 | 519 | 17 | 464 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 4tf4_B | 0 | 45 | 646 | 5 | 529 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
