| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si000642m |
| Family | CBM49 |
| Protein Properties | Length: 642 Molecular Weight: 69465.6 Isoelectric Point: 8.1734 |
| Chromosome | Chromosome/Scaffold: 5 Start: 2126458 End: 2129401 |
| Description | glycosyl hydrolase 9C3 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM49 | 549 | 626 | 1.8e-37 |
| IEIEQNATASWTERSKTYHRYSVTVTNRSLKTVHELHIGISKLYGRVWGVDKARYGYVFPSWLQSLPAGKSAAFVYIQ | |||
| GH9 | 41 | 504 | 0 |
| DYRQALSKSILYFEAQRSGPLPSGQRIAWRANSGLLDGKANGADLVGGYYDAGDNVKFGLPMAFTVTMMSWSVLEYGEQMEAAGELGHAMDAVKWGTDYF VKAHPEPNVLYGEVGDGDSDHDCWQRPEDMTTSRQAYRLDPQHPGSELAAETAAAMAGASLVFRSSNPGYANQLLQHSKQLFDFADKYRGRYDSSITVAR KYYASSSGYGDELLWAAAWLYEATGDRRYLDYLANNADALGGTGWSINQFGWDVKYPGVQILAAKFLLQGKAGGAHADVLRRYKQKADLFACSCLGKGGS NNVRRTPGGMIYHQSWNNVQFVTSASFLLAAYADHLAAARQEAQCPSGGVRPSELLAFAKSQVDYILGSNPRATSYMVGYGATYPRQAHHRGASIVSIKA DPAFVSCQAGYNSWYHRRGSNPNLLVGATVGGPDEYDNFADERDNYQQTEATTYNNAPLMGVLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 642 Download |
| MASRRGGGGA RGVVGRMAVL VLALALAAAS EVARVAAAGH DYRQALSKSI LYFEAQRSGP 60 LPSGQRIAWR ANSGLLDGKA NGADLVGGYY DAGDNVKFGL PMAFTVTMMS WSVLEYGEQM 120 EAAGELGHAM DAVKWGTDYF VKAHPEPNVL YGEVGDGDSD HDCWQRPEDM TTSRQAYRLD 180 PQHPGSELAA ETAAAMAGAS LVFRSSNPGY ANQLLQHSKQ LFDFADKYRG RYDSSITVAR 240 KYYASSSGYG DELLWAAAWL YEATGDRRYL DYLANNADAL GGTGWSINQF GWDVKYPGVQ 300 ILAAKFLLQG KAGGAHADVL RRYKQKADLF ACSCLGKGGS NNVRRTPGGM IYHQSWNNVQ 360 FVTSASFLLA AYADHLAAAR QEAQCPSGGV RPSELLAFAK SQVDYILGSN PRATSYMVGY 420 GATYPRQAHH RGASIVSIKA DPAFVSCQAG YNSWYHRRGS NPNLLVGATV GGPDEYDNFA 480 DERDNYQQTE ATTYNNAPLM GVLARLAAGH GGGRFGHSLA DEVDATSMKS DNKTSTPSPS 540 PAVEHYSPIE IEQNATASWT ERSKTYHRYS VTVTNRSLKT VHELHIGISK LYGRVWGVDK 600 ARYGYVFPSW LQSLPAGKSA AFVYIQAAPP ADVWVTGYKL L* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00759 | Glyco_hydro_9 | 3.0e-176 | 41 | 499 | 461 | + Glycosyl hydrolase family 9. | ||
| PLN02171 | PLN02171 | 0 | 40 | 641 | 606 | + endoglucanase | ||
| PLN02340 | PLN02340 | 0 | 41 | 639 | 601 | + endoglucanase | ||
| PLN02420 | PLN02420 | 0 | 41 | 500 | 461 | + endoglucanase | ||
| PLN00119 | PLN00119 | 0 | 41 | 500 | 460 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005576 | extracellular region |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030246 | carbohydrate binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN25631.1 | 0 | 32 | 641 | 17 | 623 | unknown [Zea mays] |
| GenBank | EAY73052.1 | 0 | 3 | 641 | 2 | 640 | hypothetical protein OsI_00928 [Oryza sativa Indica Group] |
| RefSeq | NP_001042423.1 | 0 | 7 | 641 | 4 | 640 | Os01g0220100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002440792.1 | 0 | 17 | 641 | 1 | 627 | hypothetical protein SORBIDRAFT_09g006670 [Sorghum bicolor] |
| RefSeq | XP_002454930.1 | 0 | 13 | 641 | 16 | 654 | hypothetical protein SORBIDRAFT_03g001560 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 40 | 508 | 3 | 430 | A Chain A, Saicar-Synthase Complexed With Atp |
| PDB | 1ksc_A | 0 | 40 | 508 | 3 | 430 | A Chain A, Saicar-Synthase Complexed With Atp |
| PDB | 1ks8_A | 0 | 40 | 508 | 3 | 430 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 41 | 537 | 5 | 472 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 41 | 537 | 5 | 472 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
