| Basic Information | |
|---|---|
| Species | Mimulus guttatus |
| Cazyme ID | mgv1a018907m |
| Family | GH28 |
| Protein Properties | Length: 92 Molecular Weight: 9826.32 Isoelectric Point: 7.4544 |
| Chromosome | Chromosome/Scaffold: 1616 Start: 5671 End: 5946 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH28 | 12 | 87 | 4.4e-26 |
| QFENIAINGLASLNSQKFHILVYGCKKVKMVNMKISAPANSPNTDGIHIQQSSEVTVMNTHIGTGDGCISVGPDHQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 92 Download |
| MPCFTVVVGV LQFENIAING LASLNSQKFH ILVYGCKKVK MVNMKISAPA NSPNTDGIHI 60 QQSSEVTVMN THIGTGDGCI SVGPDHQNCP TQ |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02218 | PLN02218 | 9.0e-15 | 14 | 88 | 75 | + polygalacturonase ADPG | ||
| PLN02793 | PLN02793 | 3.0e-15 | 14 | 82 | 69 | + Probable polygalacturonase | ||
| PLN02155 | PLN02155 | 7.0e-16 | 14 | 88 | 75 | + polygalacturonase | ||
| pfam00295 | Glyco_hydro_28 | 2.0e-19 | 14 | 88 | 75 | + Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes is important in cell wall metabolism. | ||
| PLN02188 | PLN02188 | 3.0e-23 | 15 | 83 | 69 | + polygalacturonase/glycoside hydrolase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004650 | polygalacturonase activity |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACA49228.1 | 9e-24 | 2 | 88 | 105 | 191 | putative polygalacturonase [Olea europaea] |
| RefSeq | XP_002331621.1 | 7e-24 | 11 | 84 | 153 | 229 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002331659.1 | 2e-24 | 11 | 88 | 146 | 226 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002331662.1 | 2e-24 | 11 | 88 | 146 | 226 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002334853.1 | 2e-24 | 11 | 88 | 51 | 131 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1bhe_A | 0.004 | 12 | 82 | 158 | 228 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| EY178068 | 81 | 8 | 88 | 3e-26 |
| EY175427 | 81 | 8 | 88 | 1e-25 |
| AU224956 | 84 | 8 | 88 | 6e-24 |
| GW472749 | 87 | 2 | 88 | 1e-23 |
| JZ191141 | 87 | 2 | 88 | 1e-23 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Mimulus guttatus | mgv1a023295m | ||||
| Sequence Alignments |
|---|
 |
| Phylogeny |
|---|
 |