| Basic Information | |
|---|---|
| Species | Mimulus guttatus |
| Cazyme ID | mgv1a023295m |
| Family | GH28 |
| Protein Properties | Length: 107 Molecular Weight: 11133.7 Isoelectric Point: 6.3335 |
| Chromosome | Chromosome/Scaffold: 142 Start: 480710 End: 481143 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH28 | 1 | 80 | 1e-26 |
| NIAINGLASLNSQKFHILVDGCKKVKMVNMKISAPANSPNTDGIHIQQSSEVTVMNTHIGTGDDSISVGPDHQNLVVVGL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 107 Download |
| NIAINGLASL NSQKFHILVD GCKKVKMVNM KISAPANSPN TDGIHIQQSS EVTVMNTHIG 60 TGDDSISVGP DHQNLVVVGL LFLLLQGLGV KISDVAYEDI HGTSAA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02218 | PLN02218 | 3.0e-14 | 1 | 74 | 74 | + polygalacturonase ADPG | ||
| PLN02793 | PLN02793 | 4.0e-15 | 1 | 68 | 68 | + Probable polygalacturonase | ||
| PLN02155 | PLN02155 | 1.0e-16 | 1 | 74 | 74 | + polygalacturonase | ||
| pfam00295 | Glyco_hydro_28 | 2.0e-18 | 1 | 74 | 74 | + Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes is important in cell wall metabolism. | ||
| PLN02188 | PLN02188 | 5.0e-23 | 1 | 69 | 69 | + polygalacturonase/glycoside hydrolase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004650 | polygalacturonase activity |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACA49228.1 | 1e-25 | 1 | 77 | 118 | 194 | putative polygalacturonase [Olea europaea] |
| RefSeq | XP_002331662.1 | 2e-25 | 1 | 77 | 153 | 229 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002334853.1 | 2e-25 | 1 | 77 | 58 | 134 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1bhe_A | 0.0004 | 1 | 68 | 161 | 228 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| DN941536 | 74 | 1 | 74 | 1e-24 |
| AU224814 | 66 | 1 | 66 | 2e-24 |
| GT723328 | 73 | 2 | 74 | 2e-24 |
| EY134601 | 74 | 1 | 74 | 3e-24 |
| GW472749 | 73 | 2 | 74 | 4e-24 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Mimulus guttatus | mgv1a018907m | ||||
| Sequence Alignments |
|---|
 |
| Phylogeny |
|---|
 |