Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g019436m |
Family | CBM49 |
Protein Properties | Length: 342 Molecular Weight: 36827.9 Isoelectric Point: 10.1042 |
Chromosome | Chromosome/Scaffold: 00009 Start: 1492303 End: 1493745 |
Description | glycosyl hydrolase 9C2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM49 | 249 | 326 | 5.5e-38 |
IAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYIH | |||
GH9 | 12 | 195 | 0 |
FERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGY GNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILA |
Full Sequence |
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Protein Sequence Length: 342 Download |
MQGKAGHYAP VFERYQQKAE YFMCSCLGKG SRNVQKTPGG LIFRQRWNNM QFVTSASFLA 60 TVYSDYLASA GRDLKCSAGN VAPAELLGFA KSQVDYILGD NPRATSYMVG YGNNYPQRVH 120 HRASSIVSIK VNPSFVSCRG GYATWFSSKG SDPNLLVGAV VGGPDAYDNF GDRRDNYEQT 180 EPATYNNAPI LGILARLNAG HGGYNQLLPV IVPAATPVVT KPSPAPKPKT IPPTKPKTTP 240 APASSSGAIA IQQKLTTSWI SNGKRYYRYS TIVTNKSAKT LKNLKLSISK LYGPLWGLTN 300 LGNAYGFPSW LNNLAAGKSL EFVYIHTANA ADVSVSAYTL A* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02340 | PLN02340 | 1.0e-17 | 255 | 338 | 86 | + endoglucanase | ||
PLN00119 | PLN00119 | 7.0e-77 | 1 | 197 | 197 | + endoglucanase | ||
PLN02340 | PLN02340 | 9.0e-79 | 1 | 197 | 198 | + endoglucanase | ||
PLN02420 | PLN02420 | 4.0e-79 | 4 | 197 | 196 | + endoglucanase | ||
PLN02171 | PLN02171 | 0 | 1 | 341 | 341 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005576 | extracellular region |
GO:0005975 | carbohydrate metabolic process |
GO:0030246 | carbohydrate binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAI68019.1 | 0 | 1 | 341 | 294 | 620 | endo-beta-1,4-glucanase [Prunus persica] |
EMBL | CAI68020.1 | 0 | 1 | 341 | 294 | 620 | endo-beta-1,4-glucanase [Prunus persica] |
RefSeq | XP_002270880.1 | 0 | 1 | 341 | 297 | 629 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299478.1 | 0 | 1 | 341 | 294 | 622 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002303645.1 | 0 | 1 | 340 | 294 | 621 | glycosyl hydrolase family 9 [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2xfg_A | 2e-19 | 28 | 197 | 315 | 459 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 1ia7_A | 7e-19 | 34 | 195 | 291 | 424 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 1ia6_A | 7e-19 | 34 | 195 | 291 | 424 | A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum |
PDB | 1ksd_A | 1e-17 | 33 | 199 | 287 | 430 | A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum |
PDB | 1ksc_A | 1e-17 | 33 | 199 | 287 | 430 | A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HE640823 | 317 | 2 | 318 | 0 |
EY654794 | 208 | 1 | 208 | 0 |
EY653361 | 208 | 1 | 208 | 0 |
CK265327 | 295 | 45 | 339 | 0 |
HE640823 | 36 | 302 | 337 | 0.41 |
Sequence Alignments (This image is cropped. Click for full image.) |
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