Results - Acr-Aca DB

Anti-CRISPR Results - GCF_000025485.1 (Total 5 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

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Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Medium Confidence	Allochromatium vinosum DSM 180	NC_013851.1	WP_012969339.1	95996	96352	+	119	1	7.1339	Acr	0.354029534	1276	-5.372222	Not found in Prophage	Not found in Prophage	-	-	MSKMIAPVRWLLALSILMLGWTAGALAQTSQPVCAQEAREQAQRLLDFHVGGDDRIFIEPDVVEKAPLRNPANPKQQFQVLEVRGMILKGQYRMRLIYYRLEDSCVLMGQEILEHASL	No		Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium; Allochromatium vinosum
Acr-Aca 1	Medium Confidence	Allochromatium vinosum DSM 180	NC_013851.1	WP_012969340.1	96349	96687	+	113	-7.5	4.6275	WP_112275481.1\|HTH_XRE\|AcrIIA1\|34.1\|0.0025	0.197618436	433	-4.4878964	Not found in Prophage	Not found in Prophage	-	-	MKSAGRIVHNLFADLPTLTSGEFFEELVVFRDVRIERILSSDQPESVLYDQEQDEWVCLLQGEARLWIAGDEVELRAGDHLLIPAHTPHQVLDTSREPPCLWLAVHIHPHER	No		Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium; Allochromatium vinosum
Acr-Aca 2	Medium Confidence	Allochromatium vinosum DSM 180	NC_013851.1	WP_043795507.1	896352	896651	+	100	3	9.7589	Acr	0.142303202	426	-4.4798393	Not found in Prophage	Not found in Prophage	-	-	MQTVIETPTFQKQADAIWSEDERLDFVTWIARNPLAGDVIPGADGARKVRWVAQAKGKRGGVRVIYFNFMAQGVVCLVAIYAKSDQSSIQPNDILRAAR	No		Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium; Allochromatium vinosum
Acr-Aca 2	Medium Confidence	Allochromatium vinosum DSM 180	NC_013851.1	WP_012969994.1	896648	896956	+	103	-4.5	4.4354	AcrIIA3-0-ERS743397\|NODE_1255_length_1383_cov_5.377259_2\|HTH_XRE\|37.3\|2.6e-06	0.114736106	1803	-5.5918217	Not found in Prophage	Not found in Prophage	PHAGE_Escher_P2_NC_041848-gi\|100002\|ref\|YP_009591415.1\|\|6.88e-07	-	MNIDQIADAIEQDAGEALPGLRESLAEMRDGLVARTTTPEQMLVRSARQALGLSQPQFADLIQTPVATLRDWEQGRFTPPGAVLCLLKIVAKHPEVLTELAA	No		Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium; Allochromatium vinosum
Acr-Aca 3	Medium Confidence	Allochromatium vinosum DSM 180	NC_013851.1	WP_012970905.1	1956471	1956686	+	72	0	6.2468	Acr	0.465516149	58	-2.7817101	Not found in Prophage	Not found in Prophage	PHAGE_Mycoba_Sbash_NC_026589-gi\|764160022\|ref\|YP_009124701.1\|\|0.005	-	MSFEEAQSPITPLAYRPSEAAKLINISRSLLYRLMAEGEIPTFMVAGCRLISRRAIEEYISTREQTGQQAA	No		Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium; Allochromatium vinosum
Acr-Aca 3	Medium Confidence	Allochromatium vinosum DSM 180	NC_013851.1	WP_012970906.1	1956696	1956914	+	73	1.5	8.7092	AcrIIA15-1-WP_146529206.1\|HTH_17\|39.0\|8.4e-05	0.145784407	403	-4.4101663	Not found in Prophage	Not found in Prophage	PHAGE_Erwini_PEp14_NC_016767-gi\|374531883\|ref\|YP_005098439.1\|\|1.09e-05	-	MAETIRRLLTEKQAADKLALSQRTLQAWRRTGEGPPFVKLGGTAVRYVDSDLDAWINEQIRRSTSDSGHEAA	No		Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium; Allochromatium vinosum
Acr-Aca 4	Medium Confidence	Allochromatium vinosum DSM 180	NC_013851.1	WP_012970946.1	1992754	1993065	+	104	4.5	10.3559	AcrIF7-0-WP_099667559.1\|HTH_10\|50.0\|0.00046	0.166805667	1830	-5.6031246	Not found in Prophage	Not found in Prophage	-	-	MPRHRRTRRIGFDPGELCFKPCGRRGRQLETLTLRPDELEALRLMDLEGLYQEEAAERLGVSRTTLSRTLARARQTVAAALIGGRRLVLEPPSPPSVVEQNQE	No		Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium; Allochromatium vinosum
Acr-Aca 4	Medium Confidence	Allochromatium vinosum DSM 180	NC_013851.1	WP_012970947.1	1993189	1993635	+	149	1	8.4295	Acr	0.23747477	738	-4.933987	Not found in Prophage	Not found in Prophage	-	-	MFKFDVIRIATIAALGALSVQWGTVRADQSPPTGVAAKLEVKVLEAPQQTGYEALYRMEVISVLQSSIRVKPGDIIRVRSRLAGPDTPDQSLKPRGWIGTAYLNPDPRAIGPEARFQFVGAANGDSFAELPPTPPSVRWIEYPREGTE	No		Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium; Allochromatium vinosum
Acr-Aca 5	Medium Confidence	Allochromatium vinosum DSM 180	NC_013851.1	WP_050750328.1	2729863	2730069	-	69	2.5	9.7314	AcrIIA15-1-WP_146529206.1\|HTH_17\|40.7\|2e-06	0.162379774	832	-5.0391016	Not found in Prophage	Not found in Prophage	PHAGE_Erwini_PEp14_NC_016767-gi\|374531883\|ref\|YP_005098439.1\|\|1.41e-07	-	MPAIRENYLTKDEAAEELGVTARTLDRWFAERIGPPRTKIGKLVLYRKAALVDWVAKREEHPVREQAA	No		Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium; Allochromatium vinosum
Acr-Aca 5	Medium Confidence	Allochromatium vinosum DSM 180	NC_013851.1	WP_043795652.1	2730146	2730664	-	173	-12	4.322	Acr	0.630068051	604	-4.780326	Not found in Prophage	Not found in Prophage	-	-	MNEWIGDEHLAPGDNGEFRIITELEDPKNPRIEPERLSPEEVDSLWPAEQDALLEFVNDCALSFPCTIEQARLWAGAVLGVEFDPGERPVIRPAGVTPHQARVDLIRAALAEHGVTALTAPRGLKQRVGYQVAEQHPRLFGPSSLNAGGSFDKAWSALRDQANSENSESSEF	No		Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium; Allochromatium vinosum

Showing 1 to 10 of 10 entries

1.2 Guilt-by-Association (Graphic View)

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1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

No result on Homology Based method

3. CRISPRCasFinder Summary

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GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_000025485.1	NC_013851	NC_013851_1[2845;2936] (evidence-level=1), NC_013851_2[711826;711933] (evidence-level=1), NC_013851_3[756777;762359] (evidence-level=4), NC_013851_4[1097747;1097850] (evidence-level=1), NC_013851_5[2929163;2929250] (evidence-level=1),	5	Nb_arrays_evidence-level_1=4,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=1	CAS-TypeIE[762462;771498],	1	CAS-TypeIE (n=1),
GCF_000025485.1	NC_013852	NC_013852_1[8015;8670] (evidence-level=4), NC_013852_2[19223;19945] (evidence-level=4),	2	Nb_arrays_evidence-level_1=0,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=2	CAS-TypeIIIB[2388;7855],	1	CAS-TypeIIIB (n=1),

Showing 1 to 2 of 2 entries