Results - Acr-Aca DB

Anti-CRISPR Results - GCF_001280385.1 (Total 7 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

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Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Medium Confidence	Escherichia coli	NZ_CP012633.1	WP_001363069.1	84402	84620	-	73	5.5	11.1563	AcrIIA15-0-WP_041532372.1\|HTH_17\|37.8\|0.0028	0.141509781	1138	-4.4917464	Not found in Prophage	Not found in Prophage	PHAGE_Salmon_SPN1S_NC_016761-gi\|374531228\|ref\|YP_005098012.1\|\|0.002	-	MTAHKPASSAIPTTGYIRRFRMPELLGVSLPTIDRWVKNGTLPRPVKLTDNVTAFDAVEINNWLAERRGKVA	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 1	Medium Confidence	Escherichia coli	NZ_CP012633.1	WP_000412532.1	83971	84402	-	144	8.5	9.9208	Acr	0.273037327	196	-2.9193223	Not found in Prophage	Not found in Prophage	-	-	MEKKNRPLQAANSDIRVSDITPLTKSLQAPKRTPKKHRARVYMLRTGIEGWTENDILRYCRLSSGRNYATELERQLGITLERIDEKNPDGIGTHLRYRFSCRGDVLKVITHVNHLANINDHNGLSQQEIADILKLYPDAFNAA	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 2	Medium Confidence	Escherichia coli	NZ_CP012633.1	WP_000991571.1	866299	866874	+	192	-3.5	5.0693	Acr	0.341590117	4276	-5.782258	Not found in Prophage	Not found in Prophage	-	-	MNAIPYFDDSLAPFWPSYQSKVIGVLERALREQSCSRVRRILLRLPWEHDNAFNSRQTWFGMDFIETVSALMNAKPGRDLCWLLTRHPEKPEYHVVLCVRQEYFDGPELDRLILDAWSNVLGFASPGEAAPYQKQITRDVVLDSRSPDCEDILKDLIWAFSDFARDRRGVCDPEARCLAGNPGYPGSAGLF	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 2	Medium Confidence	Escherichia coli	NZ_CP012633.1	WP_000958091.1	866943	867179	+	79	1	7.2004	AcrIIA13-0-WP_006662529.1\|HTH_17\|67.8\|2.3e-22	0.153683147	43	-1.718636	Not found in Prophage	Not found in Prophage	PHAGE_Erwini_phiEt88_NC_015295-gi\|327198591\|ref\|YP_004327335.1\|\|8.65e-08	-	MLTSITGHDSVLLRADDPLIDMNYITSFTGMTDKWFYKLISEGHFPKPIKLGRSSRWYKSEVEQWMQQRIEESRGAAA	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 3	Medium Confidence	Escherichia coli	NZ_CP012633.1	WP_000826499.1	1493272	1493664	-	131	2	7.8577	ERS795896\|NODE_320_length_707_cov_0.874138_1\|HTH_XRE\|AcrIIA15\|50.0\|0.0055	0.289882477	1163	-4.5114107	Not found in Prophage	Not found in Prophage	-	-	MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTPAFHNTPMLLEAEEPLAEYAPGIRTPAYRQIISAIDNMTHSEQEKVAQFLSREGIRNFLARLDIDESA	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 3	Medium Confidence	Escherichia coli	NZ_CP012633.1	WP_001296278.1	1493666	1494010	-	115	3.5	10.0404	Acr	0.285416479	3189	-5.4863415	Not found in Prophage	Not found in Prophage	-	-	MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 4	Medium Confidence	Escherichia coli	NZ_CP012633.1	WP_000687871.1	1854067	1854357	-	97	-1.5	5.5675	WP_144271758.1\|HTH_37\|AcrIIA1\|48.4\|2.5e-23	0.15860238	284	-3.2331793	27	-3.2331793	PHAGE_Pseudo_SL2_NC_042081-gi\|100234\|ref\|YP_009619774.1\|\|8.53e-16	-	MKIETFDSVWDAVSDTPEQAENMRIRAELVTIINNWIEQQGFSQAQAASALGVTQPRISELARGKIQIFSIDKLITMMAHAGLHIQRIEIQYPHAA	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 4	Medium Confidence	Escherichia coli	NZ_CP012633.1	WP_001227699.1	1854347	1854685	-	113	2.5	8.8062	Acr	0.120764637	679	-4.0150104	67	-4.0150104	PHAGE_Entero_N15_NC_001901-gi\|9630516\|ref\|NP_046945.1\|\|3.62e-10	-	MRKKLAFLDTSLDDLRAFPESSRQEIGYQLDRIQQGLNPYDWKPFSTIGPGVREIRTRDADGIYRVMYIAKFEEAVYVLHCFQKKTQTTSQSDIDLDKRRYKELVQERKNEN	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 5	Medium Confidence	Escherichia coli	NZ_CP012633.1	WP_000958492.1	4369994	4370227	-	78	1	7.2004	AcrIIA13-0-WP_006662529.1\|HTH_17\|67.8\|2.3e-22	0.156257465	42	-1.7176192	Not found in Prophage	Not found in Prophage	PHAGE_Erwini_phiEt88_NC_015295-gi\|327198591\|ref\|YP_004327335.1\|\|8.44e-08	-	MLTTTSHDSVLLRADDPLIDMNYITSFTGMTDKWFYKLISEGHFPKPIKLGRSSRWYKSEVEQWMQQRIEESRGAAA	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 5	Medium Confidence	Escherichia coli	NZ_CP012633.1	WP_000991593.1	4370296	4370871	-	192	-2	5.3349	Acr	0.30509594	3467	-5.571466	Not found in Prophage	Not found in Prophage	-	-	MNAIPYFDYSLAPFWPSYQNKVVGVLERALREQSGSRIRRILLRLPCEYDNTFNSRTTWFGMDFIETVSALMNATPGRDLCWLLTRHPEKPEYHVVLCVRQEYFDGPELDRLILDAWSNVLGFASPGEAKQYQKQITRDVVLDSRSPDCENILKELIWAFSDFARDRRGVCDPEARCLAGNPGYPGSAGPF	No		Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli

Showing 1 to 10 of 18 entries

1.2 Guilt-by-Association (Graphic View)

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1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

No result on Homology Based method

3. CRISPRCasFinder Summary

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GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_001280385.1	NZ_CP012633	NZ_CP012633_1[2371007;2371130] (evidence-level=1), NZ_CP012633_2[2981113;2981204] (evidence-level=1), NZ_CP012633_3[3102750;3103138] (evidence-level=4), NZ_CP012633_4[3112199;3112646] (evidence-level=4), NZ_CP012633_5[3283846;3283976] (evidence-level=1), NZ_CP012633_6[4188135;4188274] (evidence-level=1),	6	Nb_arrays_evidence-level_1=4,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=2	CAS-TypeIF[3103679;3112026],	1	CAS-TypeIF (n=1),

Showing 1 to 1 of 1 entries