Results - Acr-Aca DB

Anti-CRISPR Results - GCF_001516365.2 (Total 8 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

Show entries

Search:

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Low Confidence	Pseudomonas aeruginosa	NZ_CP008862.2	WP_003117363.1	88084	88632	-	183	5.5	9.6751	Acr	0.073813768	3527	-5.629212	245	-5.629212	PHAGE_Pseudo_JBD25_NC_027992-gi\|100002\|ref\|YP_009168727.1\|\|1.82e-132	-	MQLQCPCCGEQFPVEAGFADTDGKRLAALFAGLDPKLGRAILNYLRLFSPAKRGLRMTRAIKLVEELLNLVNTGTVQKDARSNDTKPASPRLWTTGIEQMITGRERLQLPLENHNYLRAVVWGLASDPAQALAASSKRPQAGGPSTQQLLQDQVGRIQSDIVLGLITKEDGERQIAALKGGA	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 1	Low Confidence	Pseudomonas aeruginosa	NZ_CP008862.2	WP_023081750.1	88632	89198	-	189	13.5	10.8521	Acr	0.075228491	2267	-5.3719416	173	-5.3719416	PHAGE_Pseudo_JBD25_NC_027992-gi\|100003\|ref\|YP_009168728.1\|\|4.40e-133	-	MALARGLLSKIHIARQQLGLQDDVYRQKLQMMFGKGSARDLNLRQAEQLLTEFKRLGWQPQPSKRAAGKPHNWRQLPAEVEVIEAQLTNMGLPWSYADAIAKRQFGVAKVAWLKKPEQLKAVLAALHVEQEKRGLLGNVEELLKLLGEHDPNWRVDLEHLPKGWERRRPILKSLVETLRAAASARGLL	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 1	Low Confidence	Pseudomonas aeruginosa	NZ_CP008862.2	WP_016852433.1	89185	89652	-	156	8.5	10.6081	Acr	0.211141941	1932	-5.281804	154	-5.281804	PHAGE_Pseudo_JBD25_NC_027992-gi\|100004\|ref\|YP_009168729.1\|\|6.33e-112	-	MERYHSTAGDPPRRDADVKRQEAQELDELVQQFLAGGGQIEKVGYKMRELPDTFVINPMKTPVYNGALAENSSLKAKPAAPRTQAKTEPQRSPAPLPALQPAPGVNPKVWLSRMIKAQALLAAQTARLARELGVSDAELRRLGRRHGMEVFHGTR	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 1	Low Confidence	Pseudomonas aeruginosa	NZ_CP008862.2	WP_023081749.1	89652	89843	-	64	4.5	10.3558	Acr	0.213973706	370	-4.0171733	25	-4.0171733	PHAGE_Pseudo_JBD18_NC_027986-gi\|100004\|ref\|YP_009168282.1\|\|4.85e-41	-	MSQANPFIRPDKDYGAVSTDDRLRALDSFNLEQCRAALSVPGLQKTVEKKLHSRIRQLNKEAR	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 1	Low Confidence	Pseudomonas aeruginosa	NZ_CP008862.2	WP_003127781.1	87719	88087	-	123	4	7.6098	WP_066050855.1\|HTH_IclR-0-AcrIIA1\|36.6\|0.0096	0.124001552	1576	-5.1433425	125	-5.1433425	PHAGE_Pseudo_JBD25_NC_027992-gi\|100001\|ref\|YP_009168726.1\|\|1.43e-86	-	MKQSSILAETRHELLDDIAAHTATVLSEHGIDAGLAEQAGHAVADHLANQWRGATLYIPSDYRHQVTKRDLQILSEFNGRNHHALARKYGLTPSSIYKLLKRIQDRKFERDQGKLDLGDGLA	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 2	Low Confidence	Pseudomonas aeruginosa	NZ_CP008862.2	WP_031633370.1	98399	98737	+	113	2	8.0477	WP_018125152.1\|HTH_19\|AcrIF9\|32.9\|9.2e-05	0.117986884	2494	-5.4287453	180	-5.4287453	PHAGE_Pseudo_JBD25_NC_027992-gi\|100021\|ref\|YP_009168746.1\|\|3.43e-19	-	MPQNIGDRIRQIRGGLGVGEFAERLGVNRKTVARWESNEALPDGASLLTLHSCFGADPGWILTGGGAQPSPAELAPDERILLDNYRHSPPDAQAALKATSDAFARRTGKKAG	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 2	Low Confidence	Pseudomonas aeruginosa	NZ_CP008862.2	WP_010791819.1	98754	99257	+	168	-5.5	4.6112	Acr	0.193600132	726	-4.5746517	59	-4.5746517	PHAGE_Pseudo_JBD25_NC_027992-gi\|100022\|ref\|YP_009168747.1\|\|4.67e-112	-	MDFKVLLGAVMLVSLSVAGCSTKNYGRQPELTDFERQTMSCREIDLEQAKVQGFLTHVREESEFDGRSVLSFLGDFGIGNLMEKDAAVDSANQRLTQLAGAKMQRGCTYAYEAEAPAQQPYAPPRAYAPDGPASASARSVDAQLDELNRMQLPYEEYQRRYREITGQ	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 3	Low Confidence	Pseudomonas aeruginosa	NZ_CP008862.2	WP_003084864.1	624147	624599	-	151	-0.5	6.2429	WP_117418946.1\|HTH_24-0-AcrIIC5\|37.9\|5.8e-21	0.110539826	1779	-5.2219167	Not found in Prophage	Not found in Prophage	-	-	MDDLSRRLLARYQKGLPICAEPYRRMAETLGCSEAEVLERLRRLEADGALSRVGPVLRHQRAGASTLAALAVPEERLQRVAERISQYAEVNHNYQREHRYNLWFVLTAGDRAQLDRVLAEIAADTGLQPLDLPMQEAYCIDLAFPLEASR	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 3	Low Confidence	Pseudomonas aeruginosa	NZ_CP008862.2	WP_003084862.1	623626	624150	-	175	8	9.0928	WP_117418947.1\|HTH_24\|AcrIIC5\|36.0\|1e-15	0.147677686	2133	-5.335764	Not found in Prophage	Not found in Prophage	-	-	MNPVEPLAAPQRQHLRYLLEQGLPLASRPYRVLAERIGAGEDEVLEQVRRWDEDGLFRRFGVILHHRALGYTANAMLVLDVADAEVDVVGRALAHETIVSLCYRRPRRLPMWPYNLFCMIHGRERGEVERQIEALLERHALRQTPHRWLFSLRAYKQCGGRYTAPPADLERRHG	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 3	Low Confidence	Pseudomonas aeruginosa	NZ_CP008862.2	WP_003084860.1	623190	623633	-	148	-10	4.4599	WP_117418946.1\|HTH_24-0-AcrIIC5\|34.7\|3.4e-21	0.115836796	480	-4.203302	Not found in Prophage	Not found in Prophage	-	-	MDEFDRRLLNRLQHGLPLEPHPYALLAAELDCREEDILRRLDDLLDDGTLTRFGPLFDIEPLGGAFTLAAMSVPEARFEEIAALLAGWPQVAHNYRREHALNMWLVVACDSPAEVAETLARLERESGLAVLDLPKEATYHVGLHFPL	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa

Showing 1 to 10 of 21 entries

1.2 Guilt-by-Association (Graphic View)

Download SVG PNG

1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

No result on Homology Based method

3. CRISPRCasFinder Summary

Show entries

Search:

GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_001516365.2	NZ_CP008862	NZ_CP008862_1[395398;395511] (evidence-level=1), NZ_CP008862_2[3435789;3436896] (evidence-level=4), NZ_CP008862_3[3445420;3446233] (evidence-level=4),	3	Nb_arrays_evidence-level_1=1,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=2	CAS-TypeIF[3437157;3445296],	1	CAS-TypeIF (n=1),

Showing 1 to 1 of 1 entries