Results - Acr-Aca DB

Anti-CRISPR Results - GCF_001611035.1 (Total 5 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

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Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Low Confidence	Pediococcus damnosus	NZ_CP012269.1	WP_062903804.1	218397	218669	-	91	2.5	8.2605	Acr	0.191000054	18	-1.4737988	Not found in Prophage	Not found in Prophage	-	-	MEVKFELPQEAQDAMYKTMYDSAKDAFKAVAVQKELPEVMRLGEACTYLNCSRSTLSNFVREGLVVNQVGSLRRITKTNCDKFLKSHEVK	No	No	Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Pediococcus; Pediococcus damnosus
Acr-Aca 1	Low Confidence	Pediococcus damnosus	NZ_CP012269.1	WP_062903805.1	218669	218857	-	63	3	10.2044	WP_119995836.1\|HTH_3\|AcrIIA15\|31.9\|0.007	0.356284441	13	-1.0554421	Not found in Prophage	Not found in Prophage	PHAGE_Vibrio_Aphrodite1_NC_042100-gi\|100120\|ref\|YP_009622247.1\|\|0.003	-	MEISEELKNSLLMNRRMLSIKAMAEQTKVNRWTLTDVLNGKRTSVKPMTYNRLEDWLKEETK	No	No	Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Pediococcus; Pediococcus damnosus
Acr-Aca 2	Low Confidence	Pediococcus damnosus	NZ_CP012269.1	WP_062904050.1	1225000	1225263	-	88	4.5	9.8242	AcrIIA15-2-ERS743401\|NODE_98_length_13691_cov_8.370123_20\|HTH_XRE\|50.0\|4.9e-08	0.129933445	354	-3.8240066	44	-3.8240066	PHAGE_Bacill_BMBtpLA_NC_028748-gi\|971482513\|ref\|YP_009194014.1\|\|5.14e-09	-	MTFADQLVRQRKRAGYTRKALAEELKVSPDLISEWEHGEVEPDLSALIKLHKLYQISLDELVLSPRPHKTVSASKWLSQFDYALKKK	No	No	Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Pediococcus; Pediococcus damnosus
Acr-Aca 2	Low Confidence	Pediococcus damnosus	NZ_CP012269.1	WP_046871336.1	1225306	1225545	-	80	-1.5	5.9515	Acr	0.235762257	224	-3.313157	24	-3.313157	-	-	MASEVVLFNPGDSLGNFHDYNEAVRSGQLYKHKDNTPHELVIATDPKSDEDYLIFYAKDAVDPKTKNNHGTQYTISKHL	No	No	Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Pediococcus; Pediococcus damnosus
Acr-Aca 3	Low Confidence	Pediococcus damnosus	NZ_CP012269.1	WP_081196343.1	1377039	1377626	+	196	-1.5	5.9886	Acr	0.124506671	907	-4.7976966	Not found in Prophage	Not found in Prophage	-	-	MELNYVYAGGCIQYINDEKIVLRQGNLLLLDKDIVQRIDYTGRDDILVNILIKSDADISALFHLIPESLNIVSRLIYNIANKNSLHNNFILFDLLPNDIALSLIDALIEKGLTKNASPQRNQSMELLMSALIIELKTAIVKSEINFSDSDMEGVLPIIRYVNANYATTSLATASHHFGYNGNYLSNKLKHAMKVV	No	No	Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Pediococcus; Pediococcus damnosus
Acr-Aca 3	Low Confidence	Pediococcus damnosus	NZ_CP012269.1	WP_017866964.1	1377678	1377935	+	86	6	10.0999	AcrIIA15-0-REF:Bacilli_gi_379704392-792400-832873_56\|HTH_7\|47.0\|4.4e-19	0.142996089	515	-4.2001696	57	-4.2001696	PHAGE_Lactob_phiAT3_NC_005893-gi\|48697273\|ref\|YP_025040.1\|\|5.15e-15	-	MTKKKYSVDFRKMIVKLYQDGAPVADLTDEYGVSNVTIYKWINLYKEDKGSGISKSDVLALQKRLKQLESENDILKKALTIFAKK	No	No	Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Pediococcus; Pediococcus damnosus
Acr-Aca 4	Low Confidence	Pediococcus damnosus	NZ_CP012269.1	WP_081196362.1	1977954	1978322	-	123	6	10.4336	WP_008683820.1\|HTH_XRE\|AcrIIA1\|41.7\|0.0042	0.11938447	695	-4.488788	Not found in Prophage	Not found in Prophage	PHAGE_Lactob_LP65_NC_006565-gi\|56693136\|ref\|YP_164723.1\|\|1.28e-05	-	MADASAEKALKKVADSVSESKSKAQSASSQTAKSSSIAASNSKAAKSSTSSSSSSSSSSSSSSSSSSSSSSSNTEKKYVTVPAGEGLYRIAVNNGISQQKLMELNGLTSSSELEPGQRLRVK	No	No	Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Pediococcus; Pediococcus damnosus
Acr-Aca 4	Low Confidence	Pediococcus damnosus	NZ_CP012269.1	WP_062904252.1	1978292	1978597	-	102	12.5	11.1912	Acr	0.149276344	610	-4.369366	Not found in Prophage	Not found in Prophage	-	-	MSQNNNNDSENKNRKNQETDADQFTTDKPSRSANRKSHRYTKLIITFVGIVIVLLFISPIVVYKHNQNNFNRPQTDAQIASSKKRQMLLAKRLLMHLPKKP	No	No	Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Pediococcus; Pediococcus damnosus
Acr-Aca 5	Low Confidence	Pediococcus damnosus	NZ_CP012271.1	WP_062904319.1	7030	7362	-	111	-5.5	6.0137	Acr	0.161501992	77	-2.4240344	Not found in Prophage	Not found in Prophage	-	-	MTDPKAEVNPNHTHSLHCGHTKILHHDHIDLVEANGHLHHKHEDHWDECKIEVSAQNPEGEHPVEGEIHNEFCGHQQVPHGDHMDYLVNGRLQHVHGDHVDDHGPVDIVS	No	No	Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Pediococcus; Pediococcus damnosus
Acr-Aca 5	Low Confidence	Pediococcus damnosus	NZ_CP012271.1	WP_062904323.1	7446	7721	-	92	5.5	10.0382	WP_090793337.1\|HTH_5\|AcrIIA15\|34.6\|4.8e-07	0.147864849	698	-4.4933653	Not found in Prophage	Not found in Prophage	-	-	MDPRFFQLTRALNHPVRIQILNYLMKHGQSNVNSIVEIVNVSQPAVSRHLRILLDAYLVIDRQSGKGKIYQLADNHIMKIIELINQHVTEI	No	No	Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Pediococcus; Pediococcus damnosus

Showing 1 to 10 of 10 entries

1.2 Guilt-by-Association (Graphic View)

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1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

No result on Homology Based method

3. CRISPRCasFinder Summary

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GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_001611035.1	NZ_CP012269	NZ_CP012269_1[362321;362469] (evidence-level=1), NZ_CP012269_2[645297;645729] (evidence-level=4), NZ_CP012269_3[646994;647624] (evidence-level=4), NZ_CP012269_4[1172446;1172585] (evidence-level=1), NZ_CP012269_5[1256903;1257053] (evidence-level=1),	5	Nb_arrays_evidence-level_1=3,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=2	CAS-TypeIIA[647722;653862],	1	CAS-TypeIIA (n=1),

Showing 1 to 1 of 1 entries