Results - Acr-Aca DB

Anti-CRISPR Results - GCF_001900735.1 (Total 7 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

Show entries

Search:

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Low Confidence	Escherichia coli	NZ_CP010157.1	WP_000991576.1	878641	879213	+	191	0.5	6.6963	Acr	0.323110863	2532	-5.2567735	Not found in Prophage	Not found in Prophage	-	-	MNAIPYFDYSLAPFWPSYQNKIIGVLNRVLREQSCSRIRRILLRLPGEHGNIFSDRKTWFGMAFIETVSALMNATPGRDLCWLLTRHPEKPEYHVVLCVRQEYFDGPELDRLILDAWSNVLGFASPGEAAPYQKQITRDVVLDSCSPDCEERLKELIWAFSDFARDRRGVRDPEARYLAGNPWYPVAGQL	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 1	Low Confidence	Escherichia coli	NZ_CP010157.1	WP_000958152.1	879282	879518	+	79	2.5	8.5455	AcrIIA13-0-WP_006662529.1\|HTH_17\|69.5\|8.6e-23	0.156168522	155	-2.722451	Not found in Prophage	Not found in Prophage	PHAGE_Erwini_phiEt88_NC_015295-gi\|327198591\|ref\|YP_004327335.1\|\|2.80e-07	-	MLTSMTGHDSVLLRADDPLIDMNYITSFTGMTDKWFYKLISEGHFPKPIKLGRSSRWYKSEVEQWMQHRIEASRGAAA	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 2	Low Confidence	Escherichia coli	NZ_CP010157.1	WP_000826498.1	1496187	1496579	-	131	1.5	7.2464	ERS795896\|NODE_320_length_707_cov_0.874138_1\|HTH_XRE\|AcrIIA15\|50.0\|0.0058	0.273526451	1245	-4.5538692	Not found in Prophage	Not found in Prophage	-	-	MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTPAFHNTPMLLEAEEPLAEYAPGIRTPAYRQIISAIDNMTHSEQEKVAQFLSREGIRHFLARLDIDESE	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 2	Low Confidence	Escherichia coli	NZ_CP010157.1	WP_001445514.1	1496581	1496925	-	115	3.5	10.0404	Acr	0.279556502	2964	-5.422204	Not found in Prophage	Not found in Prophage	-	-	MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPESQGETPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 3	Low Confidence	Escherichia coli	NZ_CP010157.1	WP_073506962.1	2145438	2145992	+	185	1.5	7.2116	Acr	0.32503119	189	-2.859716	Not found in Prophage	Not found in Prophage	-	-	MRDAEFRAMLQASRQRNRYNSYSYTDTPTSYELPKLTQKERKGIDEVIRAITPRERYMPTRKSTKNSIKNYLNNFDSYEQLPSKLDDIFIGFCRGEGHPKYNKKLFYLLKNLDEINASSVTNRLQRQATRLSYELPTDAYCALLTVMCAKLIGIVEHHIAVGNIEPMENEQPDFEFDPYILEEF	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 3	Low Confidence	Escherichia coli	NZ_CP010157.1	WP_000527008.1	2145994	2146275	+	94	6.5	10.5599	Acr	0.421404778	880	-4.2504396	Not found in Prophage	Not found in Prophage	-	-	MGNKHTLTRVTKTAFEELNRIKNITGLPHSAVMKLAINRDINEQDLLNSRLEAARHHIRIKQDDLDSLKSLNAFGLDLARLLSIKIHKLAMEV	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 3	Low Confidence	Escherichia coli	NZ_CP010157.1	WP_032248366.1	2146275	2146661	+	129	4	9.0589	WP_130715003.1\|HTH_23\|AcrIIC4\|69.5\|7e-47	0.699203746	44	-1.7113037	Not found in Prophage	Not found in Prophage	-	-	MYDFYKHRDHLVRFDGKVWKDVTQTNKPKFTHQQLASRFDIWTEAQKDNGDFEFIRGFDYAYEDDLKDAIKLIENFNSIKNGDKHKANGNRYDKDLIIDAIIKGQSQSYISEKYGLSRSQYYKIKASV	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 3	Low Confidence	Escherichia coli	NZ_CP010157.1	WP_073506963.1	2146799	2147122	+	108	-8.5	4.1207	Acr	0.683478425	285	-3.2263026	Not found in Prophage	Not found in Prophage	-	-	MNNFPLQIFVDNDTAMMVQSFVDSCVSIDFDKLLKLMAENSEAIEDFIQEIETGEPRFMLPVTDSNMKRLIIEETNKYSVSPEKYLKAAIAILYADNILVTDSKVVH	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 4	Low Confidence	Escherichia coli	NZ_CP010157.1	WP_001327833.1	3817650	3817847	+	66	3.5	8.2931	Acr	0.171331903	1528	-4.756545	Not found in Prophage	Not found in Prophage	-	-	MTKQTTCIACTQQFLSWQEYSPTDFLRFSPVVMPVKVVRCFHHQRRLRLTTSGGDFYDHPSFADG	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 4	Low Confidence	Escherichia coli	NZ_CP010157.1	WP_001305352.1	3817819	3818025	+	69	2	9.9273	AcrIIA13-0-WP_006662529.1\|HTH_17\|76.2\|2.4e-25	0.151948774	3018	-5.4395924	Not found in Prophage	Not found in Prophage	PHAGE_Erwini_phiEt88_NC_015295-gi\|327198591\|ref\|YP_004327335.1\|\|2.90e-09	-	MTTPVSLMDDQMVDMTFITQLTGLTDKWFYKLIKDGAFPAPIKLGRSSRWLKSEVEAWLQARIAQSRP	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli

Showing 1 to 10 of 16 entries

1.2 Guilt-by-Association (Graphic View)

Download SVG PNG

1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

No result on Homology Based method

3. CRISPRCasFinder Summary

Show entries

Search:

GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_001900735.1	NZ_CP010157	NZ_CP010157_1[35433;35571] (evidence-level=1), NZ_CP010157_2[1147090;1147484] (evidence-level=4), NZ_CP010157_3[1173186;1174617] (evidence-level=4), NZ_CP010157_4[2349040;2349163] (evidence-level=1), NZ_CP010157_5[2949460;2949551] (evidence-level=1),	5	Nb_arrays_evidence-level_1=3,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=2	CAS-TypeIE[1164570;1173089],	1	CAS-TypeIE (n=1),

Showing 1 to 1 of 1 entries