Results - Acr-Aca DB

Anti-CRISPR Results - GCF_002012225.1 (Total 8 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

Show entries

Search:

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Low Confidence	Escherichia coli	NZ_CP019029.1	WP_000412424.1	2746437	2746901	-	155	7.5	9.609	WP_057265726.1\|HTH_38\|AcrIE7\|44.4\|1.5e-05	0.091631274	2708	-5.157927	Not found in Prophage	Not found in Prophage	-	-	MEKKLPRIKALLTPGEVAKRSGVAVSALHFYESKGLISSIRNSGNQRRYKRDVLRYVAIIKIAQRIGIPLATIREAFGVLPEGHTLSAKEWKQLSSQWREELDRRIHTLVALRDELDGCIGCGCLSRSDCPLRNPGDRLGEEGTGARLLEDEQN	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 1	Low Confidence	Escherichia coli	NZ_CP019029.1	WP_071591071.1	2746184	2746450	-	89	8	10.4351	Acr	0.26012029	3247	-5.3540545	Not found in Prophage	Not found in Prophage	-	-	MNKTKAPQGRFSLFSGLCLSLYPAGTQEGFPRRQHTSFEHVVEVPVGVDALIVCHRRFFASVKVHFLAAIFLSSQTIFYRNPERYTVR	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 2	Low Confidence	Escherichia coli	NZ_CP019029.1	WP_000356397.1	3033520	3033810	-	97	5	10.8907	AcrIIA15-1-WP_133418514.1\|HTH_19-1-AcrIIA15\|37.5\|5.9e-09	0.132240546	1795	-4.7215943	Not found in Prophage	Not found in Prophage	PHAGE_Escher_P2_NC_041848-gi\|100002\|ref\|YP_009591415.1\|\|6.53e-07	-	MDKALFERLTHSMAQMNEIIEGTRQPSRTFEVDAMKIKEIRRASGLSQSKFADLISVSVDTLRNWEQGRRSPTGPAKALLRAIANDPQHVLQALNR	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 2	Low Confidence	Escherichia coli	NZ_CP019029.1	WP_000897305.1	3033811	3034122	-	104	4	9.7791	Acr	0.176388033	691	-3.7677894	Not found in Prophage	Not found in Prophage	-	-	MLFIETEIFTEDVQKLLTDDEFSRFQFFLALNPDYGEVIPETGGLRKVRWVSGGKGKRAGVRVIYFHQVKHYEIRLLLIYRKGIKDDLSPQEKAMLRLLNTRW	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 3	Low Confidence	Escherichia coli	NZ_CP019029.1	WP_001564054.1	4133603	4134178	+	192	0	6.4571	Acr	0.303622082	4519	-5.7164288	Not found in Prophage	Not found in Prophage	-	-	MNAIPYFDYSLAPFWPSYQNKIIGVLERALREQSGSRIRRILLRLPCEYDRTFSSRKIWFGMDFIETVSALMNATPGRDLCWLLTRHPEKPEYHVVLCVRQEYFDGPELDRLILDAWSNVLGFASPGEAKQYQKQITRDVVLDSRSPDCENILKELIWAFSDFARDRRGVCDPEARCLAGNPGYPGSAGPF	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 3	Low Confidence	Escherichia coli	NZ_CP019029.1	WP_000958492.1	4134247	4134480	+	78	1	7.2004	AcrIIA13-0-WP_006662529.1\|HTH_17\|67.8\|2.7e-22	0.156257465	66	-1.7176192	Not found in Prophage	Not found in Prophage	PHAGE_Erwini_phiEt88_NC_015295-gi\|327198591\|ref\|YP_004327335.1\|\|8.44e-08	-	MLTTTSHDSVLLRADDPLIDMNYITSFTGMTDKWFYKLISEGHFPKPIKLGRSSRWYKSEVEQWMQQRIEESRGAAA	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 3	Low Confidence	Escherichia coli	NZ_CP019029.1	WP_075855364.1	4134452	4134697	+	82	-1.5	5.9311	Acr	0.11311749	2405	-5.033675	Not found in Prophage	Not found in Prophage	-	-	MRNHEEQQHETCCNAGAGIAEISPVPDAGDTPAHLSADSSGLPTVCHHFLTDSSFPSSRQSLVFVSYRPVLMCVFRVSAPA	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 4	Low Confidence	Escherichia coli	NZ_CP019029.1	WP_000826499.1	4827595	4827987	-	131	2	7.8577	ERS795896\|NODE_320_length_707_cov_0.874138_1\|HTH_XRE\|AcrIIA15\|50.0\|0.0064	0.289882477	1465	-4.5114107	Not found in Prophage	Not found in Prophage	-	-	MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTPAFHNTPMLLEAEEPLAEYAPGIRTPAYRQIISAIDNMTHSEQEKVAQFLSREGIRNFLARLDIDESA	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 4	Low Confidence	Escherichia coli	NZ_CP019029.1	WP_001339827.1	4827989	4828333	-	115	3.5	10.0404	Acr	0.26891743	3456	-5.422204	Not found in Prophage	Not found in Prophage	-	-	MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPESQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 5	Low Confidence	Escherichia coli	NZ_CP019029.1	WP_022645843.1	5192883	5193173	-	97	-0.5	6.2153	WP_144271758.1\|HTH_37\|AcrIIA1\|46.3\|1.4e-22	0.17466647	343	-3.1303222	88	-3.1303222	PHAGE_Pseudo_SL2_NC_042081-gi\|100234\|ref\|YP_009619774.1\|\|1.03e-15	-	MKIETFDSVWDTVSDTPERAENMRIRAELVTIINNWIEQQGLSQAQATSALGVTQPRISELARGKIQIFSIDKLITMMAHAGLHIQRIEIQYPHAA	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli

Showing 1 to 10 of 18 entries

1.2 Guilt-by-Association (Graphic View)

Download SVG PNG

1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

No result on Homology Based method

3. CRISPRCasFinder Summary

Show entries

Search:

GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_002012225.1	NZ_CP019029	NZ_CP019029_1[505840;505963] (evidence-level=1), NZ_CP019029_2[1190519;1190610] (evidence-level=1), NZ_CP019029_3[1323596;1323743] (evidence-level=1), NZ_CP019029_4[2368656;2368820] (evidence-level=1), NZ_CP019029_5[2538693;2538830] (evidence-level=1), NZ_CP019029_6[4414601;4415851] (evidence-level=4), NZ_CP019029_7[4441398;4442220] (evidence-level=4),	7	Nb_arrays_evidence-level_1=5,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=2	CAS-TypeIE[4432642;4441292],	1	CAS-TypeIE (n=1),

Showing 1 to 1 of 1 entries