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Anti-CRISPRDB (2018)
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Tracking Anti-CRISPR Names (2018)
Self-Targeting-Spacer-Searcher (2018)
CRISPRminer (2018)
AcRanker (2020)
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AcrCatalog (2020)
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Results
Anti-CRISPR Results -
GCF_002984125.1
(Total 1 loci with Aca homologs)
1. Guilt-by-Association
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1.1 Guilt-by-Association (Tabular View)
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Search:
Loci ID
Classification
Organism
Refseq ID
Protein ID
Start
End
Strand
aa Length
Charge
Isoelectric Point
Acr/Aca
PaCRISPR_score
AcRanker Rank
AcRanker Score
AcRanker Rank Prophage
AcRanker Score Prophage
MGE/Propahge Metadata
Acr_Hit
sequence
Self Target w/in 5000 BP
Self Target Outside 5000 BP
lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Loci ID
Classification
Organism
Refseq ID
Protein ID
Start
End
Strand
aa Length
Charge
Isoelectric Point
Acr/Aca
PaCRISPR_score
AcRanker Rank
AcRanker Score
AcRanker Rank Prophage
AcRanker Score Prophage
MGE/Propahge Metadata
Acr_Hit
sequence
Self Target w/in 5000 BP
Self Target Outside 5000 BP
lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1
Medium Confidence
Moraxella catarrhalis
NZ_CP027405.1
WP_003663492.1
680643
680867
-
75
9.5
10.3777
Acr
0.256746119
225
-3.9184937
Not found in Prophage
Not found in Prophage
-
-
MANPNQQSILSPQIQKHRQTMWQVEPYNRHGRRLNQNAYLDKLIHHAKKAELSFVGMLIYCRQMCIKHGYPTAF
No
Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxella; Moraxella catarrhalis
Acr-Aca 1
Medium Confidence
Moraxella catarrhalis
NZ_CP027405.1
WP_038519105.1
680877
681197
-
107
9
10.0371
AcrIIA9-0-3300012979_____Ga0123348_10000565_16|HTH_39|36.7|7e-08
0.392001274
407
-4.4847665
Not found in Prophage
Not found in Prophage
PHAGE_Mannhe_vB_MhS_587AP2_NC_028743-gi|970580066|ref|YP_009193610.1||3.50e-04
-
MKPAPLTQKHKKALSATTKRMYEYLLQGNSLTALDGVQLFGCLCTTQRLGELRRIYGVPIYGDYFFTSNGKRLKRYYLDADYIKQHQNSKNRPWDTSQNTNPANDQ
No
Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxella; Moraxella catarrhalis
Acr-Aca 1
Medium Confidence
Moraxella catarrhalis
NZ_CP027405.1
WP_003663490.1
681194
681394
-
67
4.5
9.9623
Acr
0.168835345
291
-4.175026
Not found in Prophage
Not found in Prophage
-
-
MTLTPIRVTKKQACELLAIGREKLRTLVENDPTFPRPYKTGNKMQSSVYFDYQALIDWHKAQGGNA
No
Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxella; Moraxella catarrhalis
Showing 1 to 3 of 3 entries
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1.2 Guilt-by-Association (Graphic View)
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Created with Snap
GCF_002984125.1 NZ_CP027405.1 GBA Results Overview
Start/End point:0/1941980
NZ_CP027405.1 Acr-Aca 1
Acr:WP_003663492.1
Aca:WP_038519105.1
Acr:WP_003663490.1
680643
680843
681043
681243
Acr-Aca 1: 680643-681394 (-)
1 Target Position:1862559-1862528
2 Target Position:1866029-1866060
1 Spacer Position:1063668-1063699
2 Spacer Position:1064511-1064542
CRISPR-Cas Array (Self Targeting Spacers)
CAS-TypeIF:1066866-1075344
CRISPR (NZ_CP027405_1:1063341-1066555)
1063341
1064276
1065211
1066147
......
......
CAS-TypeIF[1066866, 1075344]
cas1
cas3-cas2
csy1
csy2
csy3
cas6
1066866
1067801
1068736
1069672
1070607
1071542
1072478
1073413
1074348
1075284
1.3 Guilt-by-Association (Jbrowse View)
2. Homology Based
No result on Homology Based method
3. CRISPRCasFinder Summary
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entries
Search:
GCF
NC_ID
CRISPR arrays
Nb CRISPRs
Evidence levels
Cas clusters
Nb Cas
Cas Types/ Subtyes
GCF
NC_ID
CRISPR arrays
Nb CRISPRs
Evidence levels
Cas clusters
Nb Cas
Cas Types/ Subtyes
GCF_002984125.1
NZ_CP027405
NZ_CP027405_1[1063341;1066555] (evidence-level=4),
1
Nb_arrays_evidence-level_1=0,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=1
CAS-TypeIF[1066866;1075344],
1
CAS-TypeIF (n=1),
Showing 1 to 1 of 1 entries
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