Results - Acr-Aca DB

Anti-CRISPR Results - GCF_003018815.1 (Total 10 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

Show entries

Search:

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Low Confidence	Escherichia coli	NZ_CP027355.1	WP_000251073.1	422136	422429	+	98	4	10.5548	AcrIIA7-1-WP_072645192.1\|HTH_28\|97.9\|1.9e-49	0.362015329	570	-3.500236	158	-3.500236	PHAGE_Entero_HK633_NC_019719-gi\|428782569\|ref\|YP_007112324.1\|\|5.44e-66	-	MVRANKRNEALRIESALLNKIAMLGTEKTAEAVGVDKSQISRWKRDWIPKFSMLLAVLEWGVVDDDMARLARQVASILTNKKRPAATERSEQIQMEF	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 1	Low Confidence	Escherichia coli	NZ_CP027355.1	WP_033803110.1	421801	422016	+	72	5	9.368	WP_050939942.1\|HTH_XRE-0-AcrIIA15\|35.3\|5e-05	0.142336315	3097	-5.264414	682	-5.264414	PHAGE_Entero_VT2_Sakai_NC_000902-gi\|9633420\|ref\|NP_050523.1\|\|1.25e-47	-	MSNLRKYRESLSISQTTLAKAVGCTQGAIGHWESGRRFPDLKTCRALVECLNKLGAKVSLDDVFPPEHKAA	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 10	Low Confidence	Escherichia coli	NZ_CP027356.1	WP_000088325.1	4070	4438	-	123	7	10.2933	AcrVA5-2-WP_087920907.1\|HTH_Tnp_1\|30.4\|1.4e-05	0.051054374	246	-2.746788	Not found in Prophage	Not found in Prophage	PROPHAGE_Xantho_33913-gi\|21231087\|ref\|NP_637004.1\|\|3.67e-09	-	MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATVDSIGQRNSYVKTWGCGGFLNETNIYSRGKSLCF	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 10	Low Confidence	Escherichia coli	NZ_CP027356.1	WP_029594370.1	4495	4677	-	61	10.5	11.1438	Acr	0.194960131	509	-3.3996937	Not found in Prophage	Not found in Prophage	PHAGE_Erwini_PEp14_NC_016767-gi\|374531886\|ref\|YP_005098442.1\|\|2.50e-08	-	MKNIKTHTGLLIHKEQTRRVRLHETPTAWCHTHRECYSKTTGRRCGSPDSLSRLILSSMR	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 2	Low Confidence	Escherichia coli	NZ_CP027355.1	WP_049254001.1	431236	431733	+	166	11	9.325	3300014960_____Ga0134316_1000223_1\|HTH_11\|AcrIIA14\|34.7\|5.3e-12	0.095190855	622	-3.5905395	177	-3.5905395	PHAGE_Pseudo_LUZ24_NC_010325-gi\|167600403\|ref\|YP_001671903.1\|\|3.21e-31	-	MAKLTDKQELFAHPDDVYVGECVIYTGYINKRGYGQKHISRKPHYAHRIAYCEANGISLDSIKDLVVRHKCDNPSCVNPDHLIIGTVADNNRDRSRRGRNSYPDRSGEKNGMAKLKECDVICIRREYVRGSIGRGLRSLSEKYGVSTTMIADIVNYRNWSNVSGV	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 2	Low Confidence	Escherichia coli	NZ_CP027355.1	WP_040063256.1	431735	432289	+	185	-0.5	6.026	Acr	0.057157502	766	-3.775765	214	-3.775765	PHAGE_Cronob_phiES15_NC_018454-gi\|401817591\|ref\|YP_006590033.1\|\|4.59e-69	-	MKQLTPKQELFCREYLKDLNATQAAIRAGYSEKTARATGSENLSKPDIADRIAELKAERNEEVGIDAAYVLRRLTEIDQMDVLDILLANGELKPIKDWPKVWRTTLSGMDVVEMASADSAALLKKIKWPDKVKNLELLGRHVSVQAFKDNVKNEVTGADGGPVRTEITNLTPEQAAEAYKKMMG	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 3	Low Confidence	Escherichia coli	NZ_CP027355.1	WP_000824162.1	1577049	1577549	+	167	-2.5	5.1476	WP_132356487.1\|HTH_3\|AcrIIA15\|34.8\|0.00036	0.16782319	2417	-4.985424	579	-4.985424	PHAGE_Entero_HK140_NC_019710-gi\|428781988\|ref\|YP_007111752.1\|\|3.23e-13	-	MKRKSLSEIDLQAAQRLKEIWTAKKNQLGLTQERAAEILGFSTQGAVSHYLNGQTPLNLEAVIKFAGLLQVPPESIRPDMAELLQIVRMYPQESGEDNVVTISADMEQSENELPFNIDPMERDLLQTFRAFPKEDKEKMLKEMKEKKESIEEIVARWLAAQKGRRA	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 3	Low Confidence	Escherichia coli	NZ_CP027355.1	WP_000100896.1	1577567	1577758	+	64	-6.5	4.027	Acr	0.181566649	1074	-4.1207776	Not found in Prophage	Not found in Prophage	-	-	MSTALSPIISEFETVEQENSYNEWLRTKVAASLSDPRPAIPHDEVMAEMENLIAQLAATNRSE	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 3	Low Confidence	Escherichia coli	NZ_CP027355.1	WP_014966210.1	1577758	1578048	+	97	6.5	9.9854	Acr	0.148313518	937	-3.9817257	Not found in Prophage	Not found in Prophage	-	-	MLPILWLPSARDDLRQIVAYIAKENPPAARRLKIRIETSVLSLTEHPYLYPPSERVPSLREIVTHPNYIILYRVTASNIEIVNVVHSRRQYPNKTC	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Acr-Aca 4	Low Confidence	Escherichia coli	NZ_CP027355.1	WP_000958487.1	1735823	1736020	-	66	3	9.5646	AcrIIA13-0-WP_006662529.1\|HTH_17\|70.0\|1.5e-19	0.162703704	144	-2.2701273	Not found in Prophage	Not found in Prophage	PHAGE_Erwini_phiEt88_NC_015295-gi\|327198591\|ref\|YP_004327335.1\|\|6.50e-08	-	MLTTTSHDSVFLRADNSLIDMNYITSFTGMTDKWFYKLISEGHFPKPIKLGRSSRWYKSEVEQWK	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli

Showing 1 to 10 of 21 entries

1.2 Guilt-by-Association (Graphic View)

Download SVG PNG

1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

No result on Homology Based method

3. CRISPRCasFinder Summary

Show entries

Search:

GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_003018815.1	NZ_CP027355	NZ_CP027355_1[93659;93776] (evidence-level=1), NZ_CP027355_2[852694;852817] (evidence-level=1), NZ_CP027355_3[1775362;1775453] (evidence-level=1), NZ_CP027355_4[2139990;2140134] (evidence-level=1), NZ_CP027355_5[2389741;2389837] (evidence-level=1), NZ_CP027355_6[2912367;2912508] (evidence-level=1), NZ_CP027355_7[4910206;4910721] (evidence-level=4), NZ_CP027355_8[4936271;4937214] (evidence-level=4),	8	Nb_arrays_evidence-level_1=6,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=2	CAS-TypeIE[4927515;4936165],	1	CAS-TypeIE (n=1),

Showing 1 to 1 of 1 entries