Results - Acr-Aca DB

Anti-CRISPR Results - GCF_008033765.1 (Total 6 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

Show entries

Search:

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Low Confidence	Pseudomonas aeruginosa	NZ_CP028959.1	WP_003084860.1	577779	578222	-	148	-10	4.4599	WP_117418946.1\|HTH_24-0-AcrIIC5\|34.7\|3.5e-21	0.115836796	490	-4.203302	Not found in Prophage	Not found in Prophage	-	-	MDEFDRRLLNRLQHGLPLEPHPYALLAAELDCREEDILRRLDDLLDDGTLTRFGPLFDIEPLGGAFTLAAMSVPEARFEEIAALLAGWPQVAHNYRREHALNMWLVVACDSPAEVAETLARLERESGLAVLDLPKEATYHVGLHFPL	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 1	Low Confidence	Pseudomonas aeruginosa	NZ_CP028959.1	WP_003111534.1	578215	578739	-	175	8	9.0928	WP_117418947.1\|HTH_24\|AcrIIC5\|36.0\|8.3e-16	0.142689709	2115	-5.335764	Not found in Prophage	Not found in Prophage	-	-	MNPVEPLAAPQRQHLRYLLEQGLPLASRPYRVLAERIGAGEDEVLEQVRRWDEDGLFRRFGVILHHRALGYTANAMLVLDVADAEVDAVGRALAHETIVSLCYRRPRRLPMWPYNLFCMIHGRERGEVERQIEALLERHALRQTPHRWLFSLRAYKQCGGRYTAPPADLERRHG	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 1	Low Confidence	Pseudomonas aeruginosa	NZ_CP028959.1	WP_003084864.1	578736	579188	-	151	-0.5	6.2429	WP_117418946.1\|HTH_24-0-AcrIIC5\|37.9\|6e-21	0.110539826	1764	-5.2219167	Not found in Prophage	Not found in Prophage	-	-	MDDLSRRLLARYQKGLPICAEPYRRMAETLGCSEAEVLERLRRLEADGALSRVGPVLRHQRAGASTLAALAVPEERLQRVAERISQYAEVNHNYQREHRYNLWFVLTAGDRAQLDRVLAEIAADTGLQPLDLPMQEAYCIDLAFPLEASR	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 1	Low Confidence	Pseudomonas aeruginosa	NZ_CP028959.1	WP_003084858.1	577289	577804	-	172	10.5	10.066	WP_117418947.1\|HTH_24\|AcrIIC5\|35.0\|4.2e-20	0.116915664	1131	-4.8945417	Not found in Prophage	Not found in Prophage	-	-	MSACISPSDALLARRLIELTQAGLPLVADPWAWIAAQLRLSEAETLALLKRLRDAGVIRRIAAVPNHYRLGYRHNGMTVWDVADERIERLGRLVGGLSFVSHCYRRPRHLPQWRYNLFAMVHGRSEAEIEGYRQQIRLLLGEDCRADEMLVSSRILKKTGLRLAQKEERPC	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 2	Low Confidence	Pseudomonas aeruginosa	NZ_CP028959.1	WP_034019654.1	648306	648863	-	186	7	10.1296	AcrIIA14-0-WP_115347684.1\|HTH_7-1-AcrIIA14\|53.9\|1.6e-47	0.07185123	2549	-5.4421678	Not found in Prophage	Not found in Prophage	PHAGE_Burkho_KS14_NC_015273-gi\|327198275\|ref\|YP_004306850.1\|\|4.77e-52	-	MKIGYARVSRDDQQLDLQHDALTAAGCERIFSDKMSGAKASRPGLDEALAFARPGDVLVVWRLDRLGRSMSELLRLTANLEASGVGLESLKEQIDTTSAAGRLVFHVFAAMAEFERNLIRERTFAGLEAARARGRQGGRPGVPPETIAAIQALAGDRSRSPDEICKALKISRSTLYKYRQQASKS	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 2	Low Confidence	Pseudomonas aeruginosa	NZ_CP028959.1	WP_071575712.1	648052	648306	-	85	3	8.3562	Acr	0.127851511	1612	-5.1584196	Not found in Prophage	Not found in Prophage	-	-	METELKVPYLGALLLLVDCICCLIAACRRTPVLGTVASGGTAGALALVLLTRMMPFTLAAIASIAIGSVIAWMKTKSLEPCNSK	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 2	Low Confidence	Pseudomonas aeruginosa	NZ_CP028959.1	WP_034019653.1	647792	648043	-	84	-1	6.0577	Acr	0.289599625	2745	-5.484713	Not found in Prophage	Not found in Prophage	-	-	MNKNLGAAAETSVLLSDGLTDAEIEVRLAIAGYLIPRLAGTPTAREAFNALVGKFQDRYPHHKLLTHLLISLEYLEHAPDTQP	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 2	Low Confidence	Pseudomonas aeruginosa	NZ_CP028959.1	WP_034019652.1	647331	647750	-	140	1	6.8594	Acr	0.386050483	1207	-4.9489346	Not found in Prophage	Not found in Prophage	-	-	MRNRERTYSGCPVLTLATQIAPYMDNGVVPGNVEYLEVPPGKVVRKRGFWLSPGYRIHHAAVLFLISTDMYAMNADDFYERRDQIYCYLSQKAGTAYIGRVEQAGEPQQLLHPLLPDLHQPLDIQLNELAYVGRVISAI	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 2	Low Confidence	Pseudomonas aeruginosa	NZ_CP028959.1	WP_034019650.1	646858	647322	-	155	5	9.8263	AcrIIA8-1-WP_053065126.1\|HTH_24\|33.0\|3.3e-08	0.138727015	2794	-5.4960876	Not found in Prophage	Not found in Prophage	-	-	MLVGIKLDDYRRRRARLLGLPENATDADVHTHVIKGIPVAQLAKLLRNGDIVTHACEQILPSLALRKRMADRITTSGASPDDRLSADESDRLFRVVHSVVVAELLFGSREKAQRWLSKPKDRFSGNSPLQMLTSTAGAQLVEELMAQLAEGFVL	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Acr-Aca 3	Low Confidence	Pseudomonas aeruginosa	NZ_CP028959.1	WP_003093358.1	968568	968774	-	69	0	6.3079	WP_031577006.1\|HTH_3-1-AcrIIA1\|50.0\|1e-12	0.147225724	1247	-4.967127	Not found in Prophage	Not found in Prophage	PHAGE_Bacill_Pascal_NC_027372-gi\|100027\|ref\|YP_009151495.1\|\|1.50e-08	-	MRNRVRELRAERGWSQAELAGKLEVSRQTVNAIETGRYDPSLPLAFKLARVFGLAIEAIFDDREGQLD	No	No	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa

Showing 1 to 10 of 17 entries

1.2 Guilt-by-Association (Graphic View)

Download SVG PNG

1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

Show entries

Search:

GCF	NC ID	Start	End	Strand	Protein ID	aa Length	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	Acr_Hit\|pident	sequence	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

GCF	NC ID	Start	End	Strand	Protein ID	aa Length	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	Acr_Hit\|pident	sequence	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
GCF_008033765.1	NZ_CP028959.1	5122042	5122509	+	WP_147719723.1	156	0.068320423	4041	-5.7074194	275	-5.7074194	---	MANRIELELVDREVQERLAALYAAVTDTLPLMRGIAAELLAETEFAFMDEGPGWPQLSPTTVAAREAKGRGAHPILQVTNALARSITTRADRDQAQIGSNLSYAAIQQLGGQAGRGRKVTIPARPYLPVLRNGQLKPSARDAVLDVLLAALSQGR	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
GCF_008033765.1	NZ_CP028959.1	5122640	5122912	+	WP_015972868.1	91	0.929660495	1	0.3760598	1	0.3760598	AcrIF2\|100.0	MIAQQHKDTVAACEAAEAIAIAKDQVWDGEGYTKYTFDDNSVLIQSGTTQYAMDADDADSIKGYADWLDDEARSAEASEIERLLESVEEE	Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa

Showing 1 to 2 of 2 entries

3. CRISPRCasFinder Summary

GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_008033765.1	NZ_CP028959	NZ_CP028959_1[256889;256985] (evidence-level=1), NZ_CP028959_2[347234;347347] (evidence-level=1), NZ_CP028959_3[803550;803663] (evidence-level=1), NZ_CP028959_4[850762;850903] (evidence-level=1), NZ_CP028959_5[1902566;1902667] (evidence-level=1), NZ_CP028959_6[2858268;2858656] (evidence-level=4), NZ_CP028959_7[2859927;2860674] (evidence-level=4), NZ_CP028959_8[2869190;2870597] (evidence-level=4), NZ_CP028959_9[5689843;5689935] (evidence-level=1),	9	Nb_arrays_evidence-level_1=6,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=3	CAS-TypeIF[2860799;2868938],	1	CAS-TypeIF (n=1),