Results - Acr-Aca DB

Anti-CRISPR Results - GCF_008728815.1 (Total 8 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

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Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Low Confidence	Staphylococcus lugdunensis	NZ_CP041722.1	WP_002460717.1	536509	536700	+	64	6	10.5344	WP_066083800.1\|HTH_3\|AcrIIA1\|48.3\|1.5e-13	0.148673474	535	-3.4930837	Not found in Prophage	Not found in Prophage	PHAGE_Paenib_Vegas_NC_028767-gi\|971741619\|ref\|YP_009196140.1\|\|2.03e-08	-	MKNKIKAYRKKIGMSQETLSKNVNVSRQTINAIENNKYDPTLMLAFKLAKQFDTTVDDLFSTK	No	No	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus lugdunensis
Acr-Aca 1	Low Confidence	Staphylococcus lugdunensis	NZ_CP041722.1	WP_002479021.1	536718	536927	+	70	5	9.8679	Acr	0.344395973	1621	-5.0827622	Not found in Prophage	Not found in Prophage	-	-	MLKKQDEMERHHFSIASKWTIGYFFIALFIYSVYTKITTGQFDIIWLILMVGLVLFWGILTWHKYHTRL	No	No	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus lugdunensis
Acr-Aca 1	Low Confidence	Staphylococcus lugdunensis	NZ_CP041722.1	WP_002460715.1	536155	536496	+	114	6	10.0101	Acr	0.260987999	2037	-5.48907	Not found in Prophage	Not found in Prophage	-	-	MKILAYIGFFIFSVSWSIVTTALLPAESVDGRKKDDTKYDERQRRMFLEIFARTFVWIVYIMLSSVFLRLFGIYKKVSESLFIFKDYPELLYILLGLLFLVMNYFSVKKKYTT	No	No	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus lugdunensis
Acr-Aca 2	Low Confidence	Staphylococcus lugdunensis	NZ_CP041722.1	WP_070866271.1	1100779	1101300	-	174	-6	4.7693	Acr	0.764789499	532	-3.4879594	74	-3.4879594	PHAGE_Staphy_3MRA_NC_028917-gi\|971755523\|ref\|YP_009209306.1\|\|2.48e-90	-	MGVRNSNLEIRPTLSNLQFYIGQTGKPEHDPLLDFSLLYEHAELGVKFTLSGLDRINNPYSNNNEIYLVILLYDKTGDIGFELRNFWSLYLDEKNMQKKHENIQFTLYKFEPNSKAYDFTNIYQELKVIALPEEIKENNIDKDTMLNWMSNKQLNEVFATKIPIYHSKEFNDE	No	No	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus lugdunensis
Acr-Aca 2	Low Confidence	Staphylococcus lugdunensis	NZ_CP041722.1	WP_070866272.1	1101319	1101780	-	154	-4.5	5.2774	WP_038187538.1\|HTH_23-0-AcrIIA1\|32.4\|1.1e-22	0.249224173	122	-1.7330697	26	-1.7330697	PHAGE_Staphy_CNPx_NC_031241-gi\|100034\|ref\|YP_009302052.1\|\|8.63e-92	-	MGLYEEMLIKHDYIEIKETDVMPDNLSGVWLDDLILINSNLPETRKTEVLYEELAHHKLTYGNILDQSKWINRKFENYARRHGYEAALPLRIIVEAHNYGVSSLYELADYVQLSEEYIAEILKHYKNKYGIGTHYGEYLITFDQLRVFKYKEI	No	No	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus lugdunensis
Acr-Aca 2	Low Confidence	Staphylococcus lugdunensis	NZ_CP041722.1	WP_070817183.1	1101792	1102115	-	108	4	9.7735	WP_099963157.1\|HTH_3\|AcrIIA15\|33.7\|3.8e-12	0.100432571	300	-2.8115833	47	-2.8115833	PHAGE_Staphy_CNPx_NC_031241-gi\|100035\|ref\|YP_009302053.1\|\|2.66e-73	-	MRTSAEIGKLIKQLRKKNNVNLTDFATKIGVNKSTLSRYENGSRKIPMEDIAEIANALNVTPESLLLKNKQPETEVQHRAAHLEGELTDDEWQRVLDYADYIKSKRK	No	No	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus lugdunensis
Acr-Aca 3	Low Confidence	Staphylococcus lugdunensis	NZ_CP041722.1	WP_070866274.1	1105013	1105210	+	66	4	10.105	WP_002480768.1\|HTH_3\|AcrIIA1\|90.0\|2.6e-26	0.183967375	311	-2.8730917	48	-2.8730917	PHAGE_Staphy_29_NC_007061-gi\|66396252\|ref\|YP_240574.1\|\|1.19e-27	-	MLNLKELREAKGLSRYQLAKKTGLQNSTIRSAELENSNPGFLTVKKICDALKVDINKVKEIEQTT	No	No	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus lugdunensis
Acr-Aca 3	Low Confidence	Staphylococcus lugdunensis	NZ_CP041722.1	WP_070866275.1	1105224	1105535	+	104	5	10.0975	Acr	0.557408967	850	-4.1097894	106	-4.1097894	PHAGE_Staphy_phiETA2_NC_008798-gi\|122891724\|ref\|YP_001004270.1\|\|2.89e-54	-	MNKLYKTPLLITMAVVTWKVWRIGNSKPTLGEVYRRNKPELPTVTLNKNGLFINDFRVPYVLEEGVNVKKSMNNLYTVSLVFFAKRIIADNYEADNPENQQLF	No	No	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus lugdunensis
Acr-Aca 4	Low Confidence	Staphylococcus lugdunensis	NZ_CP041722.1	WP_001231376.1	1295461	1295664	+	68	4.5	9.9415	Acr	0.285330755	433	-3.2582178	Not found in Prophage	Not found in Prophage	-	-	MRKQVIITKTVVGWYNIKDTQHNLMLNIPPKVFEQYFPDVSKDVQVACLEMDLSKITEIKNKKKVGS	No	No	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus lugdunensis
Acr-Aca 4	Low Confidence	Staphylococcus lugdunensis	NZ_CP041722.1	WP_070817129.1	1296050	1296370	+	107	-5	4.8227	WP_110073714.1\|HTH_17-0-AcrVA5\|39.4\|0.0094	0.650342132	50	-0.9536061	Not found in Prophage	Not found in Prophage	PHAGE_Staphy_PT1028_NC_007045-gi\|66395180\|ref\|YP_239451.1\|\|1.94e-20	-	MNWEIRNLMCNIEIVKEKLEDVATTHTWFVDGRFTKRSLKTKEEVVNYGLAYNEHRIHNEQVTELMLTYLEELDGLMNKFHEIEKASSDVSLATESDDAKKLKITE	No	No	Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus lugdunensis

Showing 1 to 10 of 22 entries

1.2 Guilt-by-Association (Graphic View)

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1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

No result on Homology Based method

3. CRISPRCasFinder Summary

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GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_008728815.1	NZ_CP041722	NZ_CP041722_1[46739;46825] (evidence-level=1), NZ_CP041722_2[187625;187705] (evidence-level=1), NZ_CP041722_3[219932;220012] (evidence-level=1), NZ_CP041722_4[404007;404090] (evidence-level=1), NZ_CP041722_5[743877;744699] (evidence-level=4), NZ_CP041722_6[1531214;1531304] (evidence-level=1), NZ_CP041722_7[2095506;2095592] (evidence-level=1), NZ_CP041722_8[2188296;2188390] (evidence-level=1), NZ_CP041722_9[2432189;2432268] (evidence-level=1),	9	Nb_arrays_evidence-level_1=8,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=1	CAS-TypeIIIA[744886;753439],	1	CAS-TypeIIIA (n=1),

Showing 1 to 1 of 1 entries